Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_F07
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 77 2e-14
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 43 3e-04
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34) 41 0.001
SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32) 40 0.001
SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 39 0.003
SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 39 0.003
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22) 39 0.004
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28) 37 0.018
SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31) 36 0.032
SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08) 36 0.032
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 34 0.096
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 34 0.096
SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24) 31 1.2
SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031) 30 1.6
SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021) 30 2.1
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8) 29 4.8
SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08) 28 6.3
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +3
Query: 75 QKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEWXXXX 254
+K K P P R +SA MLWLN R ++K +NPG+SVTE++K GE+WK++ DK++W
Sbjct: 534 KKKKDPNAPKRAMSAYMLWLNDTRQEIKDKNPGISVTEVSKVAGEMWKNLTDKSKWEEKA 593
Query: 255 XXXXXXXXXDLESYNAN 305
++ YN N
Sbjct: 594 AIEKQKYVQRMKEYNEN 610
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/54 (29%), Positives = 34/54 (62%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
++K K+ +P +PLSA ++ +A ++ +NP EIAK G++W+++ ++
Sbjct: 916 KRKTKIEGEPPKPLSAYQIFFKETQAAIRLQNPSAQFGEIAKIVGQMWENLPEE 969
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM--KDKTEW 242
+++ K P KP R LSA ++N R +K +NP S ++K GE+W M DKT++
Sbjct: 93 KKQTKDPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQY 151
>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ ENP + +EI+K+ G WK + D
Sbjct: 329 RPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 370
>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
Length = 179
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ ENP + +EI+K+ G WK + D
Sbjct: 12 RPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 53
>SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32)
Length = 398
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W +AR +L + P L E++K G++WK + D
Sbjct: 66 RPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWKLLND 107
>SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 267
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W + R QL +ENP L ++I+K G W+ +
Sbjct: 9 RPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 494
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W + R QL +ENP L ++I+K G W+ +
Sbjct: 9 RPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
Length = 299
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 108 PLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
PLSA LW N AR L NP +S ++ KK WK + +K
Sbjct: 230 PLSAFELWANQARKDLLVSNPDISAKKLKKKLKRKWKEIDEK 271
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 90 PAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
P +P PL++ + RA+L + P L TE+A K + W+ M ++
Sbjct: 149 PNQPKMPLTSYFRYCQKHRAKLAKKYPNLKSTELAAKLSKKWRKMSEE 196
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 75 QKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
Q K K RP+++ M+W SAR +L + P + E++K G++W+ +
Sbjct: 103 QLPKKDPKVKRPMNSFMVWAQSARRKLAEQYPHVHNAELSKMLGKLWRML 152
>SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
RP++A M+W R ++ +NP + +EI+K+ G WK + ++
Sbjct: 791 RPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQ 833
>SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++ M+W R Q+ ENPG++ ++K G WK +
Sbjct: 10 RPMNCFMVWSREKRCQILQENPGINNARLSKLLGMAWKKL 49
>SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28)
Length = 245
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RPL++ M+W R + ENP + EI+K G+ W+ M +
Sbjct: 12 RPLNSFMVWAKEKRRAMNRENPKMRNAEISKILGDEWRKMPE 53
>SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ E+P + EI+K+ G+ WK + +
Sbjct: 47 RPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLGKRWKLLSE 88
>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
Length = 367
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
RP+++ M+W R + ENP L EI+K G+ W + K
Sbjct: 96 RPMNSFMIWAKVMRRKFAEENPKLHNAEISKLLGKAWNELTTK 138
>SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08)
Length = 324
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 84 KMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
K P P +PL M + Q+K++NP + +I K G++W+ + D
Sbjct: 23 KPPKPPEKPLMPYMRYSRKVWDQVKNQNPDFKLWDIGKIIGQMWRDLDD 71
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMK--DKTEWX 245
R+ ++ P PL+ + +LN R +++SE+P L E+ K G W M DK +
Sbjct: 135 RKTLRDTNAPKAPLTGYVQFLNEQREKVRSEHPELPFPEVTKILGAEWSKMSQDDKQRYL 194
Query: 246 XXXXXXXXXXXXDLESY 296
+LE+Y
Sbjct: 195 DDAERDKERYIIELENY 211
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 93 AKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTE 239
AK RP++A M+W R+ + P + EI+ + GEIW + + +
Sbjct: 99 AKVKRPMNAFMIWARLHRSTIAKRYPQANNAEISIRLGEIWNDLSSEQQ 147
>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
RP++A M+W R E P + +EI+K G WK+MKD+
Sbjct: 11 RPMNAFMVWSKERRRIKSQECPRMHNSEISKILGCEWKAMKDE 53
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 96 KPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
K RPL+A +LW R + +ENP + +I++K G W+ + ++
Sbjct: 18 KIKRPLNAFILWSKKRRRVIANENPQMHNFDISRKLGLEWQKLTEE 63
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 99 PXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
P PL+ + +LN R +++SENP L E+ + G +W +
Sbjct: 177 PKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQL 218
>SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W R +L NP L E++K G W+++
Sbjct: 368 RPMNAFMVWAQVERRRLADANPELHNAELSKMLGLTWRAL 407
>SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W R ++ E P + +EI+K+ G W S+
Sbjct: 10 RPMNAYMVWSRKERRRIAEECPRMLNSEISKRLGLEWNSL 49
>SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 84 KMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
K+P KP R S L++ A++K+EN G+S +I ++ G W+++
Sbjct: 372 KLPRKPPRHFS---LFMRENFAKIKAENQGMSNPDIMRELGAKWRNL 415
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 96 KPXRPLSASMLW---LNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
KP P++ + + LNS R +K ++P L+ EI K G+ W S+
Sbjct: 193 KPKAPVTGYVHYVRFLNSRRESVKHQHPHLTFPEITKMLGQEWNSL 238
>SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24)
Length = 201
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
RP++A M+W + R +L + P + EI+K G W + ++
Sbjct: 11 RPMNAFMVWSRTERRKLALKYPNMLNCEISKLLGAEWSRLSEE 53
>SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031)
Length = 406
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 LWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMK--DKTEW 242
LWL R Q++ ENP + ++ K + WK + +K W
Sbjct: 338 LWLEENRDQIEEENPDIPDEDVVKIAMKTWKGLDSVEKKVW 378
>SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021)
Length = 200
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 126 LWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
LWL R Q++ ENP + ++ K + WK +
Sbjct: 45 LWLEENRDQIEEENPDIPDEDVVKIAMKTWKGL 77
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 13 LRLQFGCVPVQKFFQNFLPSGKKSKCRPSRSV 108
+R + CVP+ Q +LP +S+CR S+ +
Sbjct: 1772 VRQRTRCVPLSYIHQRWLPGSDRSECRTSQGL 1803
>SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8)
Length = 996
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 36 PSSKILSKFFAIRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGG-EI 212
PS+++ A+R V + +P + + WL S Q + + IAKK
Sbjct: 491 PSTRVFVTRPAVRPSVSLSVRPLKASYDNQTWLVSCMCQGSKKIFDRINSVIAKKRNFNQ 550
Query: 213 WKSMKDKTEW 242
WKS K +W
Sbjct: 551 WKSTKAVIDW 560
>SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08)
Length = 271
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 108 PLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
P++A M+ R S NPG+ +E +K G WK +
Sbjct: 12 PMNAFMVCSRGKRKHYASINPGMHNSEFSKSLGPEWKML 50
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,591,943
Number of Sequences: 59808
Number of extensions: 261869
Number of successful extensions: 687
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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