Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_F07
(699 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein ... 88 1e-17
M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility ... 88 1e-17
AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p pro... 88 1e-17
AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950 prot... 88 1e-17
AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-P... 88 1e-17
AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-P... 88 1e-17
X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein ... 83 4e-16
AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p pro... 83 4e-16
AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-P... 83 4e-16
AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-P... 83 4e-16
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 79 8e-15
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 79 8e-15
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 79 8e-15
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 77 2e-14
AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p pro... 60 3e-09
AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA... 60 3e-09
AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA... 59 5e-09
AJ251580-1|CAB63903.1| 529|Drosophila melanogaster Sox100B prot... 43 3e-04
AE014297-4702|AAF57112.2| 529|Drosophila melanogaster CG15552-P... 43 3e-04
BT001514-1|AAN71269.1| 572|Drosophila melanogaster LD44245p pro... 40 0.004
AJ252124-1|CAB64386.1| 571|Drosophila melanogaster SoxNeuro pro... 40 0.004
AE014134-1564|AAF52712.1| 572|Drosophila melanogaster CG18024-P... 40 0.004
X89811-1|CAA61938.1| 393|Drosophila melanogaster ssrp2 protein. 39 0.006
X81456-1|CAA57212.1| 328|Drosophila melanogaster protein ( D.me... 39 0.006
U13881-1|AAA50238.1| 393|Drosophila melanogaster DNA-binding pr... 39 0.006
AY060841-1|AAL28389.1| 385|Drosophila melanogaster GM02110p pro... 39 0.006
AE014298-2374|AAF48594.2| 385|Drosophila melanogaster CG12223-P... 39 0.006
AE014298-2373|AAN09396.1| 385|Drosophila melanogaster CG12223-P... 39 0.006
AE014298-2372|AAN09395.1| 385|Drosophila melanogaster CG12223-P... 39 0.006
AE014298-2371|AAN09394.2| 386|Drosophila melanogaster CG12223-P... 39 0.006
AE014298-2370|AAS65386.1| 393|Drosophila melanogaster CG12223-P... 39 0.006
X96419-1|CAA65279.1| 382|Drosophila melanogaster SOX-domain pro... 38 0.017
U68056-1|AAB49673.1| 382|Drosophila melanogaster SOX HMG domain... 38 0.017
BT030105-1|ABN49244.1| 382|Drosophila melanogaster FI01304p pro... 38 0.017
BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p pro... 38 0.017
BT022122-1|AAY51517.1| 784|Drosophila melanogaster IP09065p pro... 38 0.017
AY118670-1|AAM50530.1| 381|Drosophila melanogaster AT02631p pro... 38 0.017
AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E prote... 38 0.017
AE014296-2364|AAF49753.1| 382|Drosophila melanogaster CG5893-PA... 38 0.017
AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA... 38 0.017
BT022137-1|AAY51532.1| 388|Drosophila melanogaster IP01552p pro... 37 0.030
AE014296-2362|AAF49756.1| 388|Drosophila melanogaster CG7345-PA... 37 0.030
AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p pro... 36 0.040
AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-P... 36 0.040
AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protei... 35 0.092
AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB... 35 0.092
AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA... 35 0.092
AY061457-1|AAL29005.1| 257|Drosophila melanogaster LD40493p pro... 34 0.16
AE014297-2817|AAF55779.2| 284|Drosophila melanogaster CG4217-PB... 34 0.16
AE014297-2816|AAN14356.1| 257|Drosophila melanogaster CG4217-PA... 34 0.16
AB045318-1|BAB20089.1| 257|Drosophila melanogaster mitochondria... 34 0.16
AB040745-1|BAB62223.1| 257|Drosophila melanogaster mitochondria... 34 0.16
BT011194-1|AAR88556.1| 398|Drosophila melanogaster LD16247p pro... 31 2.0
AY058722-1|AAL13951.1| 376|Drosophila melanogaster LD46483p pro... 31 2.0
AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA... 31 2.0
AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB... 31 2.0
AE013599-3141|AAF46682.1| 376|Drosophila melanogaster CG9418-PA... 31 2.0
>X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility
group protein protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-PB,
isoform B protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-PA,
isoform A protein.
Length = 112
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 87 MPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
M KP RPLSA MLWLNSAR +K ENPG+ VTE+AK+GGE+W++MKDK+EW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW 52
>X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein
protein.
Length = 111
Score = 83.0 bits (196), Expect = 4e-16
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +3
Query: 96 KPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXX 275
+P RPLSA MLWLN R Q+K +NPG VT+IAK+GGE+W+ +KDKTEW
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEY 64
Query: 276 XXDLESYNAN 305
++ Y AN
Sbjct: 65 NKAVKEYEAN 74
>AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p
protein.
Length = 111
Score = 83.0 bits (196), Expect = 4e-16
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +3
Query: 96 KPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXX 275
+P RPLSA MLWLN R Q+K +NPG VT+IAK+GGE+W+ +KDKTEW
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEY 64
Query: 276 XXDLESYNAN 305
++ Y AN
Sbjct: 65 NKAVKEYEAN 74
>AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-PB,
isoform B protein.
Length = 111
Score = 83.0 bits (196), Expect = 4e-16
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +3
Query: 96 KPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXX 275
+P RPLSA MLWLN R Q+K +NPG VT+IAK+GGE+W+ +KDKTEW
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEY 64
Query: 276 XXDLESYNAN 305
++ Y AN
Sbjct: 65 NKAVKEYEAN 74
>AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-PA,
isoform A protein.
Length = 111
Score = 83.0 bits (196), Expect = 4e-16
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +3
Query: 96 KPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXX 275
+P RPLSA MLWLN R Q+K +NPG VT+IAK+GGE+W+ +KDKTEW
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEY 64
Query: 276 XXDLESYNAN 305
++ Y AN
Sbjct: 65 NKAVKEYEAN 74
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 78.6 bits (185), Expect = 8e-15
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +3
Query: 75 QKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
+K K KP R +A MLWLN R +K ENPG+ VTEIAKKGGE+WK +KDK++W
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKW 602
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 78.6 bits (185), Expect = 8e-15
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +3
Query: 75 QKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
+K K KP R +A MLWLN R +K ENPG+ VTEIAKKGGE+WK +KDK++W
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKW 602
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 78.6 bits (185), Expect = 8e-15
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +3
Query: 75 QKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
+K K KP R +A MLWLN R +K ENPG+ VTEIAKKGGE+WK +KDK++W
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKW 602
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 77.4 bits (182), Expect = 2e-14
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +3
Query: 75 QKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDKTEW 242
+K K KP R +A MLWLN R K ENPG+ VTEIAKKGGE+WK +KDK++W
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVTEIAKKGGEMWKELKDKSKW 602
>AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p
protein.
Length = 138
Score = 60.1 bits (139), Expect = 3e-09
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +3
Query: 93 AKPXRPLSASMLWLNSA-RAQLKSENPGLSVTEIAKKGGEIWKSMKD--KTEWXXXXXXX 263
A+P +P+SA MLW+NS R +++E+P SV E++ KGGE+W++M D K W
Sbjct: 6 ARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKA 65
Query: 264 XXXXXXDLESYNA 302
LE +NA
Sbjct: 66 MAEYKEKLEKWNA 78
>AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA
protein.
Length = 133
Score = 60.1 bits (139), Expect = 3e-09
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +3
Query: 93 AKPXRPLSASMLWLNSA-RAQLKSENPGLSVTEIAKKGGEIWKSMKD--KTEWXXXXXXX 263
A+P +P+SA MLW+NS R +++E+P SV E++ KGGE+W++M D K W
Sbjct: 6 ARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKA 65
Query: 264 XXXXXXDLESYNA 302
LE +NA
Sbjct: 66 MAEYKEKLEKWNA 78
>AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA
protein.
Length = 126
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/53 (49%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +3
Query: 93 AKPXRPLSASMLWLNSA-RAQLKSENPGLSVTEIAKKGGEIWKSM--KDKTEW 242
A+P +P+SA MLW+NS R +K+E+P SV E++ KGGE+W++M +DK W
Sbjct: 6 ARPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVW 58
>AJ251580-1|CAB63903.1| 529|Drosophila melanogaster Sox100B protein
protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W +AR + + P L +E++K G++WK++KD
Sbjct: 79 RPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKD 120
>AE014297-4702|AAF57112.2| 529|Drosophila melanogaster CG15552-PA
protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W +AR + + P L +E++K G++WK++KD
Sbjct: 79 RPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKD 120
>BT001514-1|AAN71269.1| 572|Drosophila melanogaster LD44245p
protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ S+NP + +EI+K+ G WK + +
Sbjct: 181 RPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSE 222
>AJ252124-1|CAB64386.1| 571|Drosophila melanogaster SoxNeuro
protein.
Length = 571
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ S+NP + +EI+K+ G WK + +
Sbjct: 180 RPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSE 221
>AE014134-1564|AAF52712.1| 572|Drosophila melanogaster CG18024-PA
protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ S+NP + +EI+K+ G WK + +
Sbjct: 181 RPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSE 222
>X89811-1|CAA61938.1| 393|Drosophila melanogaster ssrp2 protein.
Length = 393
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 262 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 312
>X81456-1|CAA57212.1| 328|Drosophila melanogaster protein (
D.melanogaster mRNAfor an open reading frame. ).
Length = 328
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 197 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 247
>U13881-1|AAA50238.1| 393|Drosophila melanogaster DNA-binding
protein protein.
Length = 393
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 262 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 312
>AY060841-1|AAL28389.1| 385|Drosophila melanogaster GM02110p
protein.
Length = 385
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 254 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 304
>AE014298-2374|AAF48594.2| 385|Drosophila melanogaster CG12223-PC,
isoform C protein.
Length = 385
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 254 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 304
>AE014298-2373|AAN09396.1| 385|Drosophila melanogaster CG12223-PB,
isoform B protein.
Length = 385
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 254 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 304
>AE014298-2372|AAN09395.1| 385|Drosophila melanogaster CG12223-PA,
isoform A protein.
Length = 385
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 254 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 304
>AE014298-2371|AAN09394.2| 386|Drosophila melanogaster CG12223-PD,
isoform D protein.
Length = 386
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 255 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 305
>AE014298-2370|AAS65386.1| 393|Drosophila melanogaster CG12223-PE,
isoform E protein.
Length = 393
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
R+++K P P R LSA + N R ++K+ NP V +IAK+ G W +
Sbjct: 262 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 312
>X96419-1|CAA65279.1| 382|Drosophila melanogaster SOX-domain
protein protein.
Length = 382
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R Q+ +NP + +EI+K+ G WK + +
Sbjct: 144 RPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAE 185
>U68056-1|AAB49673.1| 382|Drosophila melanogaster SOX HMG domain
protein protein.
Length = 382
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R Q+ +NP + +EI+K+ G WK + +
Sbjct: 144 RPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAE 185
>BT030105-1|ABN49244.1| 382|Drosophila melanogaster FI01304p
protein.
Length = 382
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R Q+ +NP + +EI+K+ G WK + +
Sbjct: 144 RPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAE 185
>BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p
protein.
Length = 784
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W R +L ENP L +++K G+ W+S+
Sbjct: 217 RPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>BT022122-1|AAY51517.1| 784|Drosophila melanogaster IP09065p
protein.
Length = 784
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W R +L ENP L +++K G+ W+S+
Sbjct: 217 RPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>AY118670-1|AAM50530.1| 381|Drosophila melanogaster AT02631p
protein.
Length = 381
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R Q+ +NP + +EI+K+ G WK + +
Sbjct: 143 RPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAE 184
>AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E protein
protein.
Length = 718
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W R +L ENP L +++K G+ W+S+
Sbjct: 217 RPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>AE014296-2364|AAF49753.1| 382|Drosophila melanogaster CG5893-PA
protein.
Length = 382
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R Q+ +NP + +EI+K+ G WK + +
Sbjct: 144 RPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAE 185
>AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA
protein.
Length = 784
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSM 224
RP++A M+W R +L ENP L +++K G+ W+S+
Sbjct: 217 RPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>BT022137-1|AAY51532.1| 388|Drosophila melanogaster IP01552p
protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.030
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ +NP + +EI+K+ G WK + +
Sbjct: 123 RPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTE 164
>AE014296-2362|AAF49756.1| 388|Drosophila melanogaster CG7345-PA
protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.030
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ +NP + +EI+K+ G WK + +
Sbjct: 123 RPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTE 164
>AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p
protein.
Length = 571
Score = 36.3 bits (80), Expect = 0.040
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
RP++A M+W R ++ +NP + +EI+K+ G WK + ++
Sbjct: 250 RPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEE 292
>AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-PA
protein.
Length = 571
Score = 36.3 bits (80), Expect = 0.040
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
RP++A M+W R ++ +NP + +EI+K+ G WK + ++
Sbjct: 250 RPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEE 292
>AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protein
protein.
Length = 470
Score = 35.1 bits (77), Expect = 0.092
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 66 AIRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWK 218
A R K P RP++A M+W R ++ P L EI+K+ G W+
Sbjct: 174 ATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQ 224
>AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB,
isoform B protein.
Length = 669
Score = 35.1 bits (77), Expect = 0.092
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 66 AIRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWK 218
A R K P RP++A M+W R ++ P L EI+K+ G W+
Sbjct: 176 ATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQ 226
>AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA,
isoform A protein.
Length = 669
Score = 35.1 bits (77), Expect = 0.092
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 66 AIRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWK 218
A R K P RP++A M+W R ++ P L EI+K+ G W+
Sbjct: 176 ATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQ 226
>AY061457-1|AAL29005.1| 257|Drosophila melanogaster LD40493p
protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.16
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 69 IRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIW 215
+ +++ +P +P +PL+ ++ R +LK+ NP ++ E+ ++ + W
Sbjct: 41 LEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNW 89
>AE014297-2817|AAF55779.2| 284|Drosophila melanogaster CG4217-PB,
isoform B protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.16
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 69 IRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIW 215
+ +++ +P +P +PL+ ++ R +LK+ NP ++ E+ ++ + W
Sbjct: 68 LEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNW 116
>AE014297-2816|AAN14356.1| 257|Drosophila melanogaster CG4217-PA,
isoform A protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.16
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 69 IRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIW 215
+ +++ +P +P +PL+ ++ R +LK+ NP ++ E+ ++ + W
Sbjct: 41 LEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNW 89
>AB045318-1|BAB20089.1| 257|Drosophila melanogaster mitochondrial
transcription factorA protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.16
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 69 IRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIW 215
+ +++ +P +P +PL+ ++ R +LK+ NP ++ E+ ++ + W
Sbjct: 41 LEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNW 89
>AB040745-1|BAB62223.1| 257|Drosophila melanogaster mitochondrial
transcription factorA protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.16
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 69 IRQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIW 215
+ +++ +P +P +PL+ ++ R +LK+ NP ++ E+ ++ + W
Sbjct: 41 LEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNW 89
>BT011194-1|AAR88556.1| 398|Drosophila melanogaster LD16247p
protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ P + + I+K G WK+M +
Sbjct: 205 RPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSN 246
>AY058722-1|AAL13951.1| 376|Drosophila melanogaster LD46483p
protein.
Length = 376
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
++++ + P PL+ + ++N R +L+ E P + E + GE W + ++
Sbjct: 67 QRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEE 120
>AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA,
isoform A protein.
Length = 580
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ P + + I+K G WK+M +
Sbjct: 387 RPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSN 428
>AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB,
isoform B protein.
Length = 618
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 105 RPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKD 230
RP++A M+W R ++ P + + I+K G WK+M +
Sbjct: 425 RPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSN 466
>AE013599-3141|AAF46682.1| 376|Drosophila melanogaster CG9418-PA
protein.
Length = 376
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 72 RQKVKMPAKPXRPLSASMLWLNSARAQLKSENPGLSVTEIAKKGGEIWKSMKDK 233
++++ + P PL+ + ++N R +L+ E P + E + GE W + ++
Sbjct: 67 QRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEE 120
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,632,603
Number of Sequences: 53049
Number of extensions: 384171
Number of successful extensions: 964
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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