Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F06
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   0.71 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   5.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.7  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 12  SPILPPTPVAVGGGLAAFMSRQPEAAQAPSTG 107
           SP+  P  +   GG AA MS    A   P+TG
Sbjct: 34  SPLSNPYALKDAGGTAADMSAWTSAGLQPTTG 65


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 24  PPTPVAVGGGLAAFMSRQPEAAQAPSTGQVSIPDRR 131
           P    AVG G   +  + P+ A +PS+   S+P +R
Sbjct: 54  PLADAAVGKGFHPW-KKSPQGAPSPSSTPSSLPTQR 88


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 546 CCMRWQLRSGLRDHLR 499
           C M+W L S +  HLR
Sbjct: 524 CGMKWPLLSTINRHLR 539


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 143 CRYQLRTATRKRSLLPSATREPDLQPHSSDRTG 241
           C+Y  R  T+  +LL       D +P+S D  G
Sbjct: 82  CKYCNRQFTKSYNLLIHERTHTDERPYSCDICG 114


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -2

Query: 354 PQLRVLPALVVQERQALR 301
           P+L+  PA++V +R++LR
Sbjct: 181 PRLQRCPAMLVFDRRSLR 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,034
Number of Sequences: 336
Number of extensions: 3009
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)