Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F06
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   4.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.8  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 511 PEARPQLPTHTAQVEEASPQATPPPTV 591
           P    Q+P   A ++++ P  +  PTV
Sbjct: 106 PSYSMQVPQQGASIDDSDPDPSSEPTV 132


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 511 PEARPQLPTHTAQVEEASPQATPPPTV 591
           P    Q+P   A ++++ P  +  PTV
Sbjct: 554 PSYSMQVPQQGASIDDSDPDPSSEPTV 580


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +3

Query: 69   SRQPEAAQAPSTGQVSIPDRRRQXLADTSYVPQQENEVYYPQQPE 203
            ++Q +  Q     Q   P ++ Q        PQQ+ +    QQP+
Sbjct: 1500 TQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQ 1544


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,395
Number of Sequences: 438
Number of extensions: 4009
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)