Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F05
         (835 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   3.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   6.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.1  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 165 SSCQTKPALAMVINDNIKRN 106
           ++C TK AL   +ND +K N
Sbjct: 358 ATCGTKNALLHAVNDAMKAN 377


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = +1

Query: 346 GN-YGCKHQW 372
           GN YGC+H+W
Sbjct: 374 GNGYGCEHRW 383


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +2

Query: 536 IITILR*FKCYLI*FKCCFSFLLLPMHYITHTKPTQLINYFFIL 667
           I TI   F C LI   C + F    + +  H      I YF+ +
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYM 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,008
Number of Sequences: 336
Number of extensions: 4426
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)