BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_F05
(835 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 26 1.6
U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles ... 26 1.6
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 26 1.6
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 26 1.6
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 26 1.6
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 25 2.1
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 25.8 bits (54), Expect = 1.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 660 LFYQLQVFFNVIYYKIQMFFTSALYRKIN 746
+FYQL F +YY + F S Y ++N
Sbjct: 418 VFYQLYERFMDLYYYFKRFLPSYTYEELN 446
>U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles
gambiae putativearylphorin precursor, mRNA, partial cds.
).
Length = 207
Score = 25.8 bits (54), Expect = 1.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 660 LFYQLQVFFNVIYYKIQMFFTSALYRKIN 746
+FYQL F +YY + F S Y ++N
Sbjct: 86 VFYQLYERFMDLYYYFKRFLPSYTYEELN 114
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 25.8 bits (54), Expect = 1.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 660 LFYQLQVFFNVIYYKIQMFFTSALYRKIN 746
+FYQL F +YY + F S Y ++N
Sbjct: 418 VFYQLYERFMDLYYYFKRFLPSYTYEELN 446
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 25.8 bits (54), Expect = 1.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 660 LFYQLQVFFNVIYYKIQMFFTSALYRKIN 746
+FYQL F +YY + F S Y ++N
Sbjct: 418 VFYQLYERFMDLYYYFKRFLPSYTYEELN 446
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 25.8 bits (54), Expect = 1.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 660 LFYQLQVFFNVIYYKIQMFFTSALYRKIN 746
+FYQL F +YY + F S Y ++N
Sbjct: 418 VFYQLYERFMDLYYYFKRFLPSYTYEELN 446
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 25.4 bits (53), Expect = 2.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 93 WRSRSFFLCCH*SPSRALALFGRTITFRDSQAICGPLYR---SQRFRHSIPKFRTLLFR 260
+R + LC H S L F +T + S +CG + + SQ++R+ + K FR
Sbjct: 685 YRPQILVLCGHPSSRPLLVNFAYLLTKKLSLLVCGHVTKTHVSQKYRNHLQKKAAEWFR 743
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,144
Number of Sequences: 2352
Number of extensions: 17401
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -