Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F04
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50741-2|CAA90610.1|  383|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U58728-1|AAB00588.1|  430|Caenorhabditis elegans Temporarily ass...    29   4.4  
U29614-4|ABD94109.1|  244|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z71258-15|CAN86575.1|  135|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z71258-14|CAN86574.1|  201|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z50741-2|CAA90610.1|  383|Caenorhabditis elegans Hypothetical
           protein F55G7.2 protein.
          Length = 383

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 512 Y*LNEGCQYLGVVNFLDDQHGEGRLVPGQPLRRRILDL 399
           Y +++G  +  ++ F D QHGE  L+ G  L  +  DL
Sbjct: 215 YAVSQGMYFKNLMTFFDKQHGEIELIQGDFLHPQFHDL 252


>U58728-1|AAB00588.1|  430|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 294 protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +3

Query: 225 ESRENSPGGSPGPLRKTHLTKVIDKLQTFRRTRSLNAPSPIQQFGPCGRIMKNSAMVMQI 404
           E+++ +P  S GP+    LT    + Q+  +T S +APS +    P  +I     MV+  
Sbjct: 205 ENKKPTPEDSIGPVSSDSLTTNQGEDQSTAQTASTSAPSVVLLPEPTPKISVAETMVVPK 264

Query: 405 QDPAS 419
             PAS
Sbjct: 265 ALPAS 269


>U29614-4|ABD94109.1|  244|Caenorhabditis elegans Hypothetical
           protein F18E9.8 protein.
          Length = 244

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 412 GSWICMTMAEFFIILPHGPNCCIGDGAF 329
           G+WIC ++   +++L    +CCIG G+F
Sbjct: 117 GAWICESIKYLWVVLYDVVSCCIG-GSF 143


>Z71258-15|CAN86575.1|  135|Caenorhabditis elegans Hypothetical
           protein C01H6.8b protein.
          Length = 135

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 466 RKFTTPRYWHPSFS*YTG 519
           RKF +PR W  +FS YTG
Sbjct: 40  RKFESPRTWSETFSKYTG 57


>Z71258-14|CAN86574.1|  201|Caenorhabditis elegans Hypothetical
           protein C01H6.8a protein.
          Length = 201

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 466 RKFTTPRYWHPSFS*YTG 519
           RKF +PR W  +FS YTG
Sbjct: 106 RKFESPRTWSETFSKYTG 123


>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
           protein W05B2.4 protein.
          Length = 2265

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/64 (23%), Positives = 32/64 (50%)
 Frame = +3

Query: 429 TWYKPPLTVLVIKKVHDAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSV 608
           TW +  +  + +   H+  +  PF+Q   +L+ D  ++  V   + ++ L+  Y D T +
Sbjct: 331 TWQEEAMICVEVLS-HELIVHHPFIQPYAFLIDDYKVLWGVSPKLTEEELIKMYDDSTHL 389

Query: 609 KERL 620
           + RL
Sbjct: 390 QIRL 393


>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = +3

Query: 108 VTDYVT*KGVVYNKYYLLILG*IFRM---NEQDLMVARALAAESRENSPGGSPGPLRKTH 278
           V+D VT + VV  K YL  +  I      + QD+  AR L    RE +P   P  +    
Sbjct: 284 VSDSVTGQTVVDPKGYLTDMQSIIPQMGGDLQDIKKARMLLKSVRETNPRHPPAWVASAV 343

Query: 279 LTKVIDKLQTFR 314
           L +   KLQT R
Sbjct: 344 LEEQAGKLQTAR 355


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,542,733
Number of Sequences: 27780
Number of extensions: 437111
Number of successful extensions: 1187
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)