Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_E19
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 28 1.0
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 28 1.4
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 27 3.2
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 3.2
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 26 4.2
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 26 5.6
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 5.6
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 25 7.4
SPBC16E9.17c |rem1||meiosis-specific cyclin Rem1|Schizosaccharom... 25 7.4
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 25 7.4
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 25 7.4
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 25 9.7
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 28.3 bits (60), Expect = 1.0
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Frame = +3
Query: 27 NVLLXKSPHFGQKSVXLNHIPAVHNVXSQSAGHRWFPDPAFVKQFEGPVMYPD---ESTK 197
N L +PH G LN+ + V + HR F D FV F ++ + +
Sbjct: 484 NYTLQINPHSGINPEHLNYFKFIGRVIGLAIFHRRFVDAFFVVSFYKMILQKKVTLQDME 543
Query: 198 SLKPVPYNSIIKPAEKKVRNMI-LNFGPQHPAAHGVLRLVLELDGETVRAAD 350
S+ Y S++ + + ++ L F + V+ + L+ +G + +
Sbjct: 544 SMDAEYYRSLVWILDNDITGVLDLTFSVEDNCFGEVVTIDLKPNGRNIEVTE 595
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 261 SCCVLSFRPVL*CCYKEQVSMIWST 187
SC +L +PV C Y E+++ W T
Sbjct: 289 SCTILKSKPVSLCVYPEKITFNWLT 313
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -2
Query: 222 CYKEQVSMIWSTHQDT*LALQIVSQRLDQGTNGAQRF 112
CY EQ + + H+DT +++V+ L+ + +F
Sbjct: 578 CYLEQCLRLNTLHEDTTFPMRVVNYALEYSSKALDKF 614
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 392 DQFFSTTVQETYVRICCTDCLSVQFQYETQHPVSGWML 279
D+ S TV E+Y +I C + + Q H + GW L
Sbjct: 1901 DKEKSCTVSESYKQIDCDTYEATRLQKLLLHSIGGWPL 1938
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 420 PYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNH 569
P++D + V C++ Y K++ + R + ++T + RLL H
Sbjct: 418 PHYDSM-LVKCTCHDATYEYTRRKMIRSLIEFRVRGVKTNIPFVLRLLMH 466
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.8 bits (54), Expect = 5.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 301 CCVSYWNWTER 333
CC+S W+WT R
Sbjct: 157 CCLSNWSWTHR 167
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 392 DQFFSTTVQETYVRICCTDCL 330
D+FF T Q VR C DCL
Sbjct: 414 DRFFPGTFQTGVVRTNCVDCL 434
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 168 PVMYPDESTKSLKPVPYNSIIKPAEK 245
P+ ++ ++LKPV Y+++ KP +K
Sbjct: 437 PLSIFKDTVRALKPVEYHTMCKPVKK 462
>SPBC16E9.17c |rem1||meiosis-specific cyclin
Rem1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/72 (18%), Positives = 33/72 (45%)
Frame = +3
Query: 381 EKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRL 560
+ +++ + ++ LP DY+S++ +E + + +KY F I+R
Sbjct: 326 QSILQEENWSNTLPQITGYDYMSLVSYVHLLLKCLENPFDHHYAIYSKYATPYFHGISRQ 385
Query: 561 LNHIMAVGTHAL 596
++ +A T+ +
Sbjct: 386 VHDWIATNTNLM 397
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 141 PAFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAEKKVRNM--ILNFGPQHPAAHGVLRLV 314
P + + EG + + +K PVP +S P E N+ F HP + +LRL+
Sbjct: 32 PEYNSEEEGTLPLYSDISKLANPVPEDSSTGPTEIANPNVERRQEFKDSHPNIYFLLRLL 91
Query: 315 LEL 323
+ +
Sbjct: 92 ISV 94
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -2
Query: 513 EEHRCSAASRRPDCSTARCTSWTRSPDGRSTAGLG 409
+E C + + PD ++ RC +G T LG
Sbjct: 380 DERSCFTSKQNPDTTSDRCRQQESKDNGNRTVFLG 414
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 347 CCTDCLSVQFQYETQHPV 294
CC DCLS QY+ + +
Sbjct: 897 CCGDCLSEHIQYQKRRNI 914
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,709,707
Number of Sequences: 5004
Number of extensions: 54519
Number of successful extensions: 151
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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