Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_E19
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79601-2|CAB01886.1|  482|Caenorhabditis elegans Hypothetical pr...   247   6e-66
U00043-9|AAC77506.1|  474|Caenorhabditis elegans Temporarily ass...   246   8e-66
AC006723-6|AAF59425.1|  492|Caenorhabditis elegans Hypothetical ...    31   0.96 
Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF022968-1|ABR92613.1|  219|Caenorhabditis elegans Protein carbo...    28   5.1  
Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical...    27   9.0  

>Z79601-2|CAB01886.1|  482|Caenorhabditis elegans Hypothetical
           protein K09A9.5 protein.
          Length = 482

 Score =  247 bits (604), Expect = 6e-66
 Identities = 112/143 (78%), Positives = 125/143 (87%)
 Frame = +3

Query: 231 KPAEKKVRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYT 410
           K  EK + NMILNFGPQHPAAHGVLRLVL+L+GE +  A PHIGLLHR TEKLIE+KTYT
Sbjct: 90  KQREKNLENMILNFGPQHPAAHGVLRLVLKLEGEVIIKAIPHIGLLHRATEKLIEHKTYT 149

Query: 411 QALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHIMAVGTH 590
           QALPYFDRLDYVSMMCNEQ +SLAVEKLL ID+P RAKYIRTL  E+TR+ NHIM + TH
Sbjct: 150 QALPYFDRLDYVSMMCNEQAWSLAVEKLLGIDIPTRAKYIRTLMGELTRIQNHIMGITTH 209

Query: 591 ALDVGALTPFFWLFEEREKMMEF 659
           ALDVGA+TPFFW+FEEREK+ EF
Sbjct: 210 ALDVGAMTPFFWMFEEREKLFEF 232


>U00043-9|AAC77506.1|  474|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 99 protein.
          Length = 474

 Score =  246 bits (603), Expect = 8e-66
 Identities = 112/143 (78%), Positives = 125/143 (87%)
 Frame = +3

Query: 231 KPAEKKVRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYT 410
           K  EK + NMILNFGPQHPAAHGVLRLVL+L+GE +  A PHIGLLHR TEKLIE+KTYT
Sbjct: 82  KKREKNLENMILNFGPQHPAAHGVLRLVLKLEGEVIIKAIPHIGLLHRATEKLIEHKTYT 141

Query: 411 QALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHIMAVGTH 590
           QALPYFDRLDYVSMMCNEQ +SLA+EKLL IDVP RAKYIR LF E+TR+ NHIM + TH
Sbjct: 142 QALPYFDRLDYVSMMCNEQAFSLAIEKLLGIDVPPRAKYIRILFGELTRIQNHIMGITTH 201

Query: 591 ALDVGALTPFFWLFEEREKMMEF 659
           ALDVGA+TPFFW+FEEREK+ EF
Sbjct: 202 ALDVGAMTPFFWMFEEREKLFEF 224


>AC006723-6|AAF59425.1|  492|Caenorhabditis elegans Hypothetical
           protein Y19D10B.6 protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +3

Query: 402 TYTQALPYF--DRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHI 572
           T T  L YF     +Y+S   + + +S AVE L N+++ L   +  +L+A I ++LN +
Sbjct: 92  TATVDLEYFFETHYEYISKKNDSEKFSFAVETLENVNLTLTNIFYNSLYANI-KVLNQL 149


>Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical
           protein R17.3 protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -2

Query: 477 DCSTARCTSWTRSPDGRSTAGLGCMSCIRSVFQY-HGAGDLCEDL 346
           DC      SWT+      T G+G    +R V Q+    G  CE L
Sbjct: 243 DCVLTDWDSWTQCTADNGTCGIGTQKRLRHVIQHAERGGAACEPL 287


>AF022968-1|ABR92613.1|  219|Caenorhabditis elegans Protein
           carboxymethyltransferaseprotein 1, isoform b protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 504 DVPLRAKYIRTLFAEITRLLNHIMAVGTHALDVGA 608
           D P R  Y  T  A +  L NH++A G  ALDVG+
Sbjct: 48  DAPQRIGYNATHAAALDYLQNHLVA-GAKALDVGS 81


>Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 459 NEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHIM 575
           +E+   L   ++LNID  L A   + L  E+  LL H+M
Sbjct: 314 DEESSRLNSNQILNIDAVLEAVLHKLLLREVKPLLYHVM 352


>AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 459 NEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHIM 575
           +E+   L   ++LNID  L A   + L  E+  LL H+M
Sbjct: 314 DEESSRLNSNQILNIDAVLEAVLHKLLLREVKPLLYHVM 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,359,086
Number of Sequences: 27780
Number of extensions: 325088
Number of successful extensions: 932
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)