Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_E18
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0038 + 375893-376093,376758-376883,376978-377177,377411-37... 68 6e-12
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 54 1e-07
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 51 1e-06
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 50 2e-06
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 50 2e-06
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 44 2e-04
09_03_0035 - 11765108-11765376,11765909-11766005,11766505-117665... 32 0.38
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 31 1.2
02_02_0106 + 6814391-6817007,6817086-6817462 30 1.5
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 30 1.5
02_02_0109 + 6830802-6833412,6833491-6833861 30 2.0
05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 29 3.6
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 29 4.7
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 28 6.2
03_05_0593 - 25959013-25959789 28 8.3
>06_01_0038 +
375893-376093,376758-376883,376978-377177,377411-377502,
377966-378222,378610-378846,378986-379063,380422-380571,
380646-380720,381109-381205,381289-381341
Length = 521
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/90 (36%), Positives = 55/90 (61%)
Frame = +1
Query: 430 LSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQK 609
L+ + ++ ++ ACE++ PM + R+L NG+ ++V V KRS EL V + D+
Sbjct: 6 LAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMENRVKVFHKRSDELKVRD--DLDSP 63
Query: 610 ANILXTEVFDTELIGEGALSTFSHAHKFLL 699
A+IL +E+ D+EL+GEG + T A+ LL
Sbjct: 64 ADILVSEILDSELLGEGLIPTLQQAYDMLL 93
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 54.0 bits (124), Expect = 1e-07
Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Frame = +1
Query: 301 FADMLHDTERNQKYSKA--LKLAIEKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVA 474
+ +LH Q + + A+ + +D + V+D+G G+G+LS+ AA++GA + A
Sbjct: 175 YGQLLHQQNMLQDFVRTGTYYAAVMENRSDFEGRVVVDVGAGSGILSLFAAQAGARHVYA 234
Query: 475 CEAFQPMAECCLRILECN-GVADKVTVIPKRSTELTVGENGDMKQKANILXTEVFDTELI 651
EA + MAE R++ N + ++TVI + E+ ++ +KA+IL +E T L+
Sbjct: 235 VEASE-MAEHAQRLISGNPSLGQRITVIKGKVEEV------ELPEKADILISEPMGTLLV 287
Query: 652 GEGALSTFSHAH-KFLL 699
E L ++ A +FL+
Sbjct: 288 NERMLESYVIARDRFLV 304
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +1
Query: 253 MQDEDYDYHQEIARSAFAD-MLHDTERNQKYSKALKLAIEKMHNDGKKANVLDIGTGTGL 429
+ + D Y Q + + M+ D R Y A+ + +GK V+D+G GTG+
Sbjct: 41 LAEHDRIYFQSYSHIGIHEAMIKDRVRTDAYRSAIMH--HQKFIEGKV--VMDVGCGTGI 96
Query: 430 LSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDM 600
LS+ A++GA + A EA + MA I++ N + DKV V+ R ++ V + D+
Sbjct: 97 LSVFCARAGAKCVYAVEASE-MATQAREIVKANNLDDKVVVVHGRVEDVEVEDKVDV 152
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 307 DMLHDTERNQKYSKALKLAIEKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 486
+ML D R + Y AL L + N A VLD+G GTG+LS+ AAK+GA ++A +
Sbjct: 268 EMLGDKVRTEAYRDAL-LGNPSLMNG---ATVLDVGCGTGILSLFAAKAGASRVIAVDGS 323
Query: 487 QPMAECCLRILECNGVA--DKVTVIPKRSTEL 576
M + + NG + + + KR T++
Sbjct: 324 AKMVSVATEVAKSNGFLYDENMEMQQKRDTQV 355
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 49.6 bits (113), Expect = 2e-06
Identities = 39/111 (35%), Positives = 56/111 (50%)
Frame = +1
Query: 268 YDYHQEIARSAFADMLHDTERNQKYSKALKLAIEKMHNDGKKANVLDIGTGTGLLSIMAA 447
Y YHQ+ +ML D R Y A+ H+ K VLD+GTG+G+L+I +A
Sbjct: 38 YLYHQK-------EMLCDRVRMDAYHSAV---FRNAHHFRGKV-VLDVGTGSGILAIWSA 86
Query: 448 KSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDM 600
++GA + A EA MAE + N VAD V VI ++ + E D+
Sbjct: 87 QAGARKVYAVEATN-MAEHARELARANDVADIVEVIQGSMEDVVLPEKVDV 136
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 400 VLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRST--E 573
VLD+G GTG+LSI A +GA + A +A +A + I+ N ++DKV V+ R
Sbjct: 85 VLDVGCGTGVLSIFCAFAGAARVYAVDA-SDIALQAMEIVRENELSDKVIVLHGRIEYYY 143
Query: 574 LTVGENGD--MKQKANILXTEVFDTELIGEGALST 672
+ + EN D +++K +++ +E L+ E L +
Sbjct: 144 IRIFENQDVEIEEKVDVIISEWMGYMLLYESMLGS 178
>09_03_0035 -
11765108-11765376,11765909-11766005,11766505-11766579,
11767367-11767650,11768466-11768562
Length = 273
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = +3
Query: 384 WKESQCLGYWHRYRA---PLHNG 443
W + C+G WH+YRA LHNG
Sbjct: 110 WHKDDCVGEWHKYRACLEKLHNG 132
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = +1
Query: 340 YSKALKLAIEKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLR-- 513
+S+A + H D K GT ++ A K G+ T+ A A+ CL+
Sbjct: 211 FSQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGK-GSATLSMAYAGAVFADACLKGL 269
Query: 514 -----ILECNGVADKVTVIPKRSTELTVGENG 594
++EC+ V VT +P ++++ +G+NG
Sbjct: 270 NGVPDVVECSFVQSTVTELPFFASKVRLGKNG 301
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 154 SHKRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDM 255
S+ RF + + KMKVF N L+G WD+
Sbjct: 466 SNNRFSGPIPTLAGKMKVFRAANNLLSGEIPWDL 499
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 376 HNDGKKANVLDIGTGTGLLSIMAAKSG 456
+ D + +VLDIGTG+G LS AK G
Sbjct: 167 NKDLRSCSVLDIGTGSGRLSQQLAKQG 193
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 KYMNTIYKVTFFNYL-LASSHKRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDM 255
++ T K +N+ L S+ +F + + KMKVF N L+G WD+
Sbjct: 447 RFSGTFPKQLPWNFTRLDISNNKFSGPIPTLAGKMKVFIAANNLLSGEIPWDL 499
>05_05_0352 +
24328117-24328303,24328451-24328559,24330634-24330692,
24331139-24331220,24331361-24331481,24331751-24332278,
24332724-24332831,24332934-24333131,24334043-24334234,
24336116-24336199,24336385-24336525,24336683-24336748,
24336880-24337047,24337134-24337463,24337568-24337666
Length = 823
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 403 LDIGTGTGLLSIMAAKSGA 459
LD GTGTG+L I A K GA
Sbjct: 666 LDYGTGTGVLGIAALKMGA 684
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +1
Query: 448 KSGADTIVACEAFQPMAECCLR-------ILECNGVADKVTVIPKRSTELTVGENG 594
++G +V A A+ CLR I+EC+ VA +VT +P ++++ +G G
Sbjct: 264 QNGGTEVVEAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCG 319
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 361 AIEKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVAC-EAFQPMAECCLRILECNGVA 537
A+ K DG V++ G G ++ A +GA AC + + + ++EC+ V
Sbjct: 229 ALTKRTQDGG-TEVVEAKAGKGSATLSMAYAGAVFANACLKGLNGVPD----VVECSFVQ 283
Query: 538 DKVTVIPKRSTELTVGENG 594
VT +P ++++ +G+NG
Sbjct: 284 STVTELPFFASKVKLGKNG 302
>03_05_0593 - 25959013-25959789
Length = 258
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = -2
Query: 662 APSPINSVSNTSVXRMLAFCFISPFSPTVSSVDLFGITVTLSATPLH------SNILRQH 501
A P +S+S TS+ FC S P +S L V ++A P +++LR+H
Sbjct: 46 AEGPSSSMSPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPEPAGVGLADVLREH 105
Query: 500 SAIG*KASQATIV 462
G KA +V
Sbjct: 106 HG-GGKAGGGKVV 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,539,811
Number of Sequences: 37544
Number of extensions: 346785
Number of successful extensions: 962
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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