Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_E16
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 93 2e-19
01_01_1152 + 9170628-9171899 81 1e-15
11_02_0011 - 7337618-7338496,7338596-7338991 75 6e-14
04_04_0619 + 26652923-26653267,26653440-26654273 75 6e-14
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 73 3e-13
11_01_0767 + 6438648-6438809,6439146-6440000 71 8e-13
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 68 7e-12
11_01_0750 - 6315126-6315896,6316371-6316784 68 1e-11
11_02_0012 - 7346282-7347136,7347234-7347593 67 1e-11
11_02_0014 - 7352619-7352918,7353173-7353418 64 2e-10
11_01_0771 + 6453130-6454488 57 2e-08
05_06_0044 - 25150322-25151260 52 7e-07
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 2.3
02_01_0384 - 2781362-2782299,2782320-2782428 30 2.3
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 3.1
05_05_0373 - 24478361-24479383 29 4.1
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 5.4
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 7.1
01_06_0373 - 28841462-28842850 28 9.4
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 93.1 bits (221), Expect = 2e-19
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Frame = +2
Query: 134 KSIVLSAFSVLPPLAQLALASDGETHEELLKAIG---FPDDDAIRTE-----FASKSRDL 289
K++ +S S+ LA L + GET ++++ +G P A+ + A S
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 290 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEE 466
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E
Sbjct: 92 DDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFES 151
Query: 467 NTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 646
T RIKD + D++ AT AVL NA+YFKG W SKFD R TSD FY+ + P M
Sbjct: 152 ATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM 211
Query: 647 YKRGDYKYGESAVLNAQLIEIPY 715
G ++Y + +++ +PY
Sbjct: 212 -SSGKWQY-IACRAGYKVLRLPY 232
>01_01_1152 + 9170628-9171899
Length = 423
Score = 80.6 bits (190), Expect = 1e-15
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
Frame = +2
Query: 128 QGKSIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD-DDAIRTEFASKSRDLRSIKG 304
QG++ ++S S LA +A + GET ELL +G P + R+ LR +
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPN 116
Query: 305 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNR 481
A V+V G L FA + + + + DF+ A+ +N +V + T
Sbjct: 117 TSF--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGL 174
Query: 482 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGD 661
I+D++ P+S+ S+T VL NA++FKG WS F T F++ ++ P M
Sbjct: 175 IRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIP 234
Query: 662 YKYGESAVLNAQLIEIPYK 718
++ +A +++PYK
Sbjct: 235 FERHVAAFPGFTALKLPYK 253
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 74.9 bits (176), Expect = 6e-14
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Frame = +2
Query: 122 IIQGKSIVLSAFSVLPPLAQLALASDGETHEELLKAIGFP--DD--DAIRTEFASKSRDL 289
+ K++V S S+ LA +A + G T +ELL +G DD +++R D
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 290 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEE 466
+ G + A V+ + +L + + + + + +F + + K IN WV +
Sbjct: 87 SASGGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSK 146
Query: 467 NTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 646
TN I +++ S+ TA VLVNAIYFKG WS+ F T+ F+ ++ VP M
Sbjct: 147 ATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFM 206
Query: 647 YKRGDYKYG 673
R D G
Sbjct: 207 SSREDQYIG 215
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 74.9 bits (176), Expect = 6e-14
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = +2
Query: 122 IIQGKSIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIK 301
I + + + S + LA LA +DGET +LL +G + A ++R+
Sbjct: 16 ITEQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP 75
Query: 302 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNT-VAAKSINDWVEENTNN 478
+L A ++V +L F + + +++DF AA +N ++ + TN
Sbjct: 76 --QLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNG 133
Query: 479 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 658
R+ + ++P + S+T VL NA++FK W KF+ T R F+ + VP +
Sbjct: 134 RLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPR 193
Query: 659 DYKYGESAVLNAQLIEIPYK 718
+ L +++++ YK
Sbjct: 194 THYAARFDGLGFKVLQLFYK 213
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/99 (35%), Positives = 57/99 (57%)
Frame = +2
Query: 422 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDR 601
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDG 268
Query: 602 DFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK 718
+F++ K+++ P M K + N +++++PY+
Sbjct: 269 EFHLLDGKSVQAPFM--STSKKQYILSYDNLKVLKLPYQ 305
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/90 (35%), Positives = 55/90 (61%)
Frame = +2
Query: 446 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 625
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D +F++ +
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 626 TIKVPMMYKRGDYKYGESAVLNAQLIEIPY 715
+++ P M R K S+ + +++++PY
Sbjct: 529 SVQAPFMSTR--KKQYLSSYDSLKVLKLPY 556
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 71.3 bits (167), Expect = 8e-13
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +2
Query: 389 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 565
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 566 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYKGDQSSLIVX 745
+ FD+ T++R+F +++VP M + + + +++ +PYK + +
Sbjct: 102 LAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYKATSDTYNLK 161
Query: 746 LQ 751
L+
Sbjct: 162 LR 163
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 68.1 bits (159), Expect = 7e-12
Identities = 33/94 (35%), Positives = 54/94 (57%)
Frame = +2
Query: 437 AKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVS 616
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F +
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 617 KDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK 718
K++ P M K S+ + +++++PY+
Sbjct: 66 DGKSVLAPFM--STSKKQYLSSYDSLKVLKLPYQ 97
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 67.7 bits (158), Expect = 1e-11
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Frame = +2
Query: 146 LSAFSVLPPLAQLALASDGETHEELLKAIGFPDDD----AIRTEFASKS-----RDLRSI 298
+SA +V LA A + G T ++L+A+G A AS+ RD +
Sbjct: 36 VSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDRSTS 95
Query: 299 KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTN 475
G L A V+ L F ++ +V+ S + DF +K A IN WV+++T
Sbjct: 96 GGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTK 155
Query: 476 NRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR 655
+ L+ ++ T VL +A+YF+G W + D R T+++ FY +++VP +
Sbjct: 156 GTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVP--FVE 213
Query: 656 GDYKYGESAVLNAQLIEIPYK 718
D + N ++I++PYK
Sbjct: 214 YDRTRLFAVHDNFKVIKLPYK 234
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 67.3 bits (157), Expect = 1e-11
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Frame = +2
Query: 134 KSIVLSAFSVLPPLAQLALASDGETHEELLKAIGFP--DD--DAIRTEFASKSRDLRSIK 301
+++V S S+ LA +A + G T +EL+ +G DD +++R D
Sbjct: 31 RNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESVRRAVEVGLADESESG 90
Query: 302 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNN 478
G + A V+ HD E A+ + + + DF + ++ K IN WV + TN
Sbjct: 91 GPRVSYACGVW-HD-----ERLAL--KPAYRA----ADFQRQPKSSRKKINKWVSKATNK 138
Query: 479 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 658
I++++ S+ TA VLVNAIYFKG WS+ F T+ F+ ++ P M R
Sbjct: 139 LIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSRE 198
Query: 659 DYKYG 673
D G
Sbjct: 199 DQYIG 203
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +2
Query: 440 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 619
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+ F+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLD 147
Query: 620 DKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYKG 721
++ V M R D G N ++++PY G
Sbjct: 148 GSSVNVRFMRSREDQYIGFYDGFN--VLKLPYNG 179
>11_01_0771 + 6453130-6454488
Length = 452
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +2
Query: 353 LDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAV 532
+D ++ + + V ++ K A K IN W T I D++ P S+ TA V
Sbjct: 146 IDAFILLLDPSMIDQCVLDLVSEKAEEARKQINAWARRATGKLITDVLPPRSVGPETAVV 205
Query: 533 LVNAIYFKGAWSSKFDERLTSDRDFY 610
L NAIYFKG W F+E T + FY
Sbjct: 206 LGNAIYFKGKWDRPFNESDTERKPFY 231
>05_06_0044 - 25150322-25151260
Length = 312
Score = 51.6 bits (118), Expect = 7e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Frame = +2
Query: 329 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVN-- 499
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+++
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILSNS 59
Query: 500 ----PDSLSSATAAV-----LVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 646
D A+ L N++YF W F LT + DF+VS D ++VP M
Sbjct: 60 IDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 325 VRHFKLNAFN*SKVTAFTREFCSYSIVVREADSFQKLFMGFTIRS 191
VRH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 312 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTMLX 133
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRRPRRG 268
Query: 132 P 130
P
Sbjct: 269 P 269
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 242 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 367
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>05_05_0373 - 24478361-24479383
Length = 340
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 431 VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLV 538
VA + +DW E + ++ D V PD+LSS AAV +
Sbjct: 153 VALREPHDWGESTAHAQL-DAVAPDALSSCDAAVFL 187
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 260 TEFASKSRDLRSIKGVELKMANKVYVHDG 346
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 300 LIDRRSRLLLANSVRIASSSGK 235
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 143 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 286
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,698,136
Number of Sequences: 37544
Number of extensions: 362018
Number of successful extensions: 949
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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