Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_E15
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            29   0.25 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            29   0.25 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   1.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   7.1  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   7.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 401  GDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQL-ALQVVENM 547
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q+ ALQ+  N+
Sbjct: 876  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 925


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 401  GDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQL-ALQVVENM 547
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q+ ALQ+  N+
Sbjct: 877  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 926


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 343 NTHLFQNCCSIISYCNFSIGCLNHLI 266
           N +L QNCC +    NF I  + + +
Sbjct: 406 NIYLVQNCCQLFFMTNFGINFILYCV 431


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 589 GSCNITKFQSSFTTLNYF 642
           G  NI     +FTTLNYF
Sbjct: 368 GFINIQAHHPNFTTLNYF 385


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +2

Query: 533 VVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 655
           VVE++S  +   N    + +++T+ N+  +S  + +  P+A
Sbjct: 183 VVESVSRSLKSGNPSTAVSSSSTNNNTSNISNRNQVNLPLA 223


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 101 LNINIMAPKAGGDAIKANSSVYKDKSKPTDIR 196
           LN+N+   +AGG ++  N S     S+P+  R
Sbjct: 879 LNLNLDRSEAGGRSLCTNGSSSGRDSQPSSAR 910


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,292
Number of Sequences: 2352
Number of extensions: 14814
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)