Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_E13
         (813 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   343   9e-95
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    61   8e-10
Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    28   9.1  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  343 bits (843), Expect = 9e-95
 Identities = 153/234 (65%), Positives = 196/234 (83%)
 Frame = +1

Query: 112 REXKATWKSNYFVKLIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 291
           RE ++TWK+NYF KL++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+R
Sbjct: 3   REDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIR 62

Query: 292 KAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVV 471
           KA++ HL  NP+LEKLLPHI  NVGFVFT+ DL E+R KLLEN+  APA+ GAIAP  V 
Sbjct: 63  KALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVK 122

Query: 472 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 651
           +P  NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++P
Sbjct: 123 LPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTP 182

Query: 652 FSYGLVVKQVYDSGTIFAPEILDIKPXDLRAKFQAGVANVXALSLAIGYPTIAS 813
           FSYGLVV+QVYD GT++ PE+LD+   +LR +F +GV NV ++SLA+ YPT+AS
Sbjct: 183 FSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLAS 236


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
 Frame = +1

Query: 133 KSNYFVKLIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 312
           K+N   ++   +D+Y   FI    N+ S +   IR   + +S    GKN ++  A+    
Sbjct: 23  KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQK 82

Query: 313 DNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AH 483
            +  A  L K    +KG  G +FT     EV  +  E   +  AR G +A  +VV+P   
Sbjct: 83  SDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGP 142

Query: 484 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 663
            +          + L +PTK+ KG I +     + K G+ +   +A +L    +    + 
Sbjct: 143 ISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFR 202

Query: 664 LVVK 675
           L+ K
Sbjct: 203 LIFK 206


>Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical
           protein T06E6.10 protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/56 (23%), Positives = 21/56 (37%)
 Frame = +2

Query: 254 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 421
           P  C+  +   C      T   ++P+  C H +  T   CSP +        C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 470 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 360
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical
           protein T23G5.1 protein.
          Length = 788

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
 Frame = +1

Query: 124 ATWKSNYFVKLIQLLDEYP---KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 294
           A W  + F+K ++   E+     C   G D+   ++ + +         V   + T+  +
Sbjct: 337 ALWIPDLFMKRVEKDQEWSLMCPCECPGLDDCWGEEFEALYAKYEAEGRV---RKTVKAR 393

Query: 295 AIKDHLDNNPALEKLLPHI--KGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 468
            + +H+ +N  +E  LP+I  K        + +L  ++   L  ++   + P  IA  ++
Sbjct: 394 KLWEHIVSNQ-IETGLPYITYKDAANRKSNQQNLGTIKCSNLCTEIIEYSAPDEIAVCNL 452

Query: 469 VIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 582
              A N  + PEK   F  L+  TK+    +  I DV+
Sbjct: 453 ASIALNRYVTPEKKFDFVKLAEVTKVITRNLNKIIDVN 490


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 409 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 558
           +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P  I+  T
Sbjct: 42  VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,244,964
Number of Sequences: 27780
Number of extensions: 420829
Number of successful extensions: 1254
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)