Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_D23
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32415| Best HMM Match : Gag_MA (HMM E-Value=3.2) 72 5e-13
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 33 0.34
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 31 0.78
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 31 1.0
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 31 1.0
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 30 2.4
SB_22488| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24) 29 4.2
SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_24263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_47600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_31302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_37774| Best HMM Match : Lectin_C (HMM E-Value=0.029) 28 9.6
SB_9027| Best HMM Match : Phage_fiber_2 (HMM E-Value=5.8) 28 9.6
>SB_32415| Best HMM Match : Gag_MA (HMM E-Value=3.2)
Length = 299
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +1
Query: 580 ETDPEVLQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKELPXTPDKYLKYSRRSWDMLIKL 759
ETD L++RQKQID GKNTV Y + QIP KR KE P TPDK+ + S RSW +++
Sbjct: 176 ETDLHKLEKRQKQIDIGKNTVAYGRFSAQIPREKRAKEDPSTPDKFQQCSTRSWVGQVRV 235
Query: 760 XRKNL 774
R+ L
Sbjct: 236 WRRRL 240
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNR--KKLKSDVENEGNLVVKLVEYETDP 591
KKR+ + ++ + K K ++ + +KN+ KK+K E E + K +E E +
Sbjct: 17 KKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAENEE 76
Query: 592 EVLQRRQKQID 624
E ++ +K+ D
Sbjct: 77 EKIEETEKEKD 87
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGN----LVVKLVEYET 585
KK++ E+EE +DK N++ + ED K KK K + E E + K + E
Sbjct: 1902 KKKKKENEEEDDK-------KNNKEENEEDEKKEKKKKEENEEEDDKKKKTKKKKKKEEE 1954
Query: 586 DPEVLQRRQKQIDYG 630
+ E +RR+K+I G
Sbjct: 1955 EQEEDERRRKEIHNG 1969
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVT-DKSMNSRTHSGEDSKNRKKLKSDV-ENEG-NLVVKLVEYETD 588
KK++ E+EE +DK T K ED + RK++ + +N G + ++ + +
Sbjct: 1929 KKKKEENEEEDDKKKKTKKKKKKEEEEQEEDERRRKEIHNGFRDNNGRDQKTNVIIEDDN 1988
Query: 589 PEVLQRRQKQIDYGKNTVGYQNYVQQIPLNKR 684
VL + ID T+ + Q L K+
Sbjct: 1989 GNVLYQGPVNIDALNKTISSREGTSQYLLQKQ 2020
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 31.5 bits (68), Expect = 0.78
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = +1
Query: 397 ETMASCYKKRRLEHEESEDKITVTDK-SMNSRTHSGED---SKNRKKLKSDVENEGNLVV 564
E A ++R+L E+++ + S +R H D + K+LK ++EN +
Sbjct: 273 EMRAELERQRKLHAMEAQNVEEARQRVSELTRKHEIADLERTSREKELKREIENRAQEIK 332
Query: 565 -KLVEYETDPE----VLQRRQKQIDYGKNTVGYQNYVQQIPLNK 681
K ++ ET E V Q QK++D K T+ Q Q + LN+
Sbjct: 333 EKAMQLETLREESEYVKQCAQKEVDTLKETIRLQKEAQLLELNR 376
>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
Length = 1035
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEV 597
KKRR E + SE K V+ S N + E K +KK K + + + +D E
Sbjct: 894 KKRRREKDSSE-KTRVSKSSKNFKAAESEKKKRKKKKKYRGHSSDD---STSDDSSDGER 949
Query: 598 LQRRQKQIDYGKNTVGYQNY 657
+R +ID KN + Y
Sbjct: 950 RERSTSRIDKKKNKKAQREY 969
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 415 YKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPE 594
Y+KRR E+EE + + +K + T ED K +K+K+++E L+ +E + +
Sbjct: 217 YQKRRNEYEEKLNALLEKEKIVEMTTLQLEDEK--EKIKNELEETKELMQAELESQAETY 274
Query: 595 VLQRRQ 612
Q R+
Sbjct: 275 TEQTRK 280
>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 439 EESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG-NLVVK 567
EE + +I D S+N+ +HS DSKNR K E G NLV +
Sbjct: 161 EEEDGEIESEDNSLNN-SHSENDSKNRVSEKKYEEKTGENLVTE 203
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 415 YKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPE 594
YKK+ LEH E + ++ + + T + S+N K +++ G +V ++++ T+ +
Sbjct: 14 YKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKA---LQSVGQIVGEVLKQLTEEK 70
Query: 595 VLQRRQKQIDYGKNTVGYQNYVQQIPLNKRTK-ELPXTPDKYLKYSRRSWDMLI 753
+ + Y VG + V + L + T+ L T ++Y R D L+
Sbjct: 71 FIVKATNGPRY---VVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLV 121
>SB_22488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 427 RLEHEESEDKI-TVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQ 603
RL+H E + + V++ S HSG+ K +KK K + G+ VV + + E LQ
Sbjct: 224 RLDHVEEDASLHVVSESSSTDSCHSGKPKKKKKKKKRAFFHVGSGVVMWL-WNDYGEELQ 282
Query: 604 RRQKQI 621
R + I
Sbjct: 283 ARHRII 288
>SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24)
Length = 2278
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 496 SGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQI 621
+G D + R +L + N G+ +L+EY +PEV Q Q+ +
Sbjct: 618 AGGDKEKRSQLLNAAGNVGSSGAQLLEYMGEPEVDQETQETL 659
>SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 439 EESEDKITVTDKSMNSRTHSGEDSKNR 519
E+ + IT++D+++N R HS E++ +
Sbjct: 491 EDGDSDITISDEAINGRRHSNEETATK 517
>SB_24263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 448 EDKITVTDKSMNSRTHSGEDSKN 516
+DK+ TDK NS +S ED KN
Sbjct: 124 QDKMEETDKGYNSELYSEEDDKN 146
>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +1
Query: 433 EHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETD-PEVLQRR 609
E EES DK+ +++ +S + S ++ + E E + YE + E+LQRR
Sbjct: 312 ESEESPDKLEESEEERSSGSDGERGSYTVNQVDGEEEEEEEEEEEEDSYEDEYTEILQRR 371
Query: 610 Q-----KQIDYGKNTV 642
+ ++I YG++ +
Sbjct: 372 RVVSFNEEISYGRSLI 387
>SB_47600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 439 EESEDKITVTDKSMNSRTHSGEDSKNRKK 525
+ S+DKI + DKS NS + + K RKK
Sbjct: 117 KNSQDKININDKSKNSISRNLTKIKKRKK 145
>SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +1
Query: 433 EHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPE 594
+ EE + K+ V ++ + +KK K + + +VK++E E D E
Sbjct: 38 KEEEEDGKVEVVEEKAAEEVKVTKSKGKKKKSKKPKKGKKKKIVKVIEEEEDEE 91
>SB_31302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 619 IDYGKNTVGYQNYVQQIPLNKRTKELPXTPDKYLKYSRRSWDMLIKLXRKN 771
I+ G N VG Q+ + P + +L TP+ + +SRR D+L L R +
Sbjct: 32 INVGTNAVGNQSISRHSPTMQGQADLTNTPEASVFFSRR--DLLRTLHRSH 80
>SB_37774| Best HMM Match : Lectin_C (HMM E-Value=0.029)
Length = 341
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 247 LLILSGFVGRQCTGRNLSLPM 185
+L+LS G QCTG NLS+ M
Sbjct: 97 ILLLSHAQGDQCTGNNLSISM 117
>SB_9027| Best HMM Match : Phage_fiber_2 (HMM E-Value=5.8)
Length = 320
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 460 TVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQK 615
++TD S + H+ D +KK+ +D + + + E T+ L R K
Sbjct: 12 SITDDSEETENHASTDDTVKKKVHADERSSRKYAIPIAELTTEMAKLLRDVK 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,132,770
Number of Sequences: 59808
Number of extensions: 347551
Number of successful extensions: 1018
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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