Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_D23
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA hai... 63 2e-10
AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone stem-... 63 2e-10
Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical p... 31 0.91
Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical p... 31 0.91
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.91
AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative pota... 31 0.91
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 30 2.1
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 29 3.7
Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z68882-13|CAA93102.1| 296|Caenorhabditis elegans Hypothetical p... 29 4.9
U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical ... 29 4.9
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 29 4.9
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 29 4.9
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 28 6.4
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 28 6.4
Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical p... 28 8.5
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 28 8.5
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 28 8.5
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical
protein R06F6.1 protein.
Length = 367
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 583 TDPEVLQRRQKQIDYGKNTVGYQNYVQQIPLNKRTK-ELPXTPDKYLKYSRRSWDMLIKL 759
TD VL+RR ++ID K YQ Y ++PL R K + P TP+K + +SRRSWD IK
Sbjct: 207 TDEAVLKRRSREIDRAKEKAVYQRYTSEVPLRDRIKGQHPRTPNKLINFSRRSWDTQIKK 266
Query: 760 XRKNL 774
+++L
Sbjct: 267 WKRSL 271
>Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA
hairpin-binding protein protein.
Length = 367
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 583 TDPEVLQRRQKQIDYGKNTVGYQNYVQQIPLNKRTK-ELPXTPDKYLKYSRRSWDMLIKL 759
TD VL+RR ++ID K YQ Y ++PL R K + P TP+K + +SRRSWD IK
Sbjct: 207 TDEAVLKRRSREIDRAKEKAVYQRYTSEVPLRDRIKGQHPRTPNKLINFSRRSWDTQIKK 266
Query: 760 XRKNL 774
+++L
Sbjct: 267 WKRSL 271
>AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone
stem-loop binding proteinCDL-1 protein.
Length = 367
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 583 TDPEVLQRRQKQIDYGKNTVGYQNYVQQIPLNKRTK-ELPXTPDKYLKYSRRSWDMLIKL 759
TD VL+RR ++ID K YQ Y ++PL R K + P TP+K + +SRRSWD IK
Sbjct: 207 TDEAVLKRRSREIDRAKEKAVYQRYTSEVPLRDRIKGQHPRTPNKLINFSRRSWDTQIKK 266
Query: 760 XRKNL 774
+++L
Sbjct: 267 WKRSL 271
>Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical
protein F55C5.3b protein.
Length = 579
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 466 TDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQ 618
+DK+ +++ ++SK +KK K + + NL V+ + + DPEVL ++K+
Sbjct: 50 SDKTSDTKVVIEDESKKKKKKK---KKDKNLDVEELPQQEDPEVLAAKEKE 97
>Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical
protein F55C5.3a protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 466 TDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQ 618
+DK+ +++ ++SK +KK K + + NL V+ + + DPEVL ++K+
Sbjct: 50 SDKTSDTKVVIEDESKKKKKKK---KKDKNLDVEELPQQEDPEVLAAKEKE 97
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 31.1 bits (67), Expect = 0.91
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 421 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVK-LVEYETD--P 591
K +++ + EDK + ++ R GE++ K +++++++ + + K LV+ D
Sbjct: 861 KVKVDAKTLEDKQKIVEELEKKRDELGEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAK 920
Query: 592 EVLQRRQK-QIDYGKNTVGYQN 654
E LQ+RQK + D K T N
Sbjct: 921 ESLQKRQKLEKDIAKETANISN 942
>AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative
potassium channel subunitn2P24 protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 466 TDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQ 618
+DK+ +++ ++SK +KK K + + NL V+ + + DPEVL ++K+
Sbjct: 50 SDKTSDTKVVIEDESKKKKKKK---KKDKNLDVEELPQQEDPEVLAAKEKE 97
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 436 HEESEDKITVTDKSMNSRTHSGEDSKNRKKLKS-DVENEGNLVVKLVEYETDPEVLQRRQ 612
H E+ K + D +M + +HS +K R+ + S ++E + + ++ E +Q+ Q
Sbjct: 207 HSENRGKASSKDNAMETNSHSSSGTKKRRVISSEELEASSSYPIASMKNCLKNEEIQKMQ 266
Query: 613 KQI 621
K +
Sbjct: 267 KAL 269
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/74 (24%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSD-----VENEGNLVVKLVEY- 579
KK++ + ++S++K + +D S +S S ++ +KK KS +++ + +K+++
Sbjct: 158 KKKKKKSKKSKNKGSSSDSSDSSDDSSDDEKPKKKKKKSKKPKKAPKSDEEVTIKIIKKP 217
Query: 580 ETDPEVLQRRQKQI 621
+ PE L+RR+ ++
Sbjct: 218 KKKPEDLERRRHRV 231
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGN 555
KK++ + + S+D +D S +S S +D K +KK +N+G+
Sbjct: 129 KKKKSKKDSSDDSSDSSDSSDSS--DSSDDDKKKKKKSKKSKNKGS 172
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 433 EHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPE 594
E EE E+++ KS +S G+ KNR K S+ E+EG + V + + E
Sbjct: 297 EIEEEEEEVKPVKKSKSSSQSVGK-RKNRPKSTSEEEDEGEEESRKVAEDAEEE 349
>Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical
protein R04D3.2 protein.
Length = 406
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 415 YKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPE 594
Y+ E +ES K + +S NSR+HS + + ++ +SD ENE N E E+ P
Sbjct: 274 YEDEEREEKESRQK---SRRSNNSRSHSTRE--HFQEDESDNENEDN-----EEDESKPR 323
Query: 595 VLQRRQKQID 624
+ RR + D
Sbjct: 324 MTNRRSRNED 333
>Z68882-13|CAA93102.1| 296|Caenorhabditis elegans Hypothetical
protein C47E12.10 protein.
Length = 296
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 412 CYKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKS 534
C K++ E ESED+ D R K RKK+K+
Sbjct: 39 CGSKKKKEKSESEDETEDEDSENQRRRKKRAADKKRKKIKA 79
>U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical
protein C18H2.4 protein.
Length = 934
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -2
Query: 423 FFITACHSFTELYLSFHLSVRLTLKLIRN 337
FF+T C + +++F ++RL+LKLIRN
Sbjct: 393 FFLT-CIAKVVTFMTFGFNIRLSLKLIRN 420
>AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical
protein Y42A5A.4 protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 317 LTKNSNVKLLDYGIIITTHSVLVFTYFIRVRW 222
LT+N VKL D+G ++ ++T ++ RW
Sbjct: 134 LTRNDQVKLGDFGFARIINTTEMYTDYVATRW 165
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEV 597
KK + + +E E+KIT+ T + S KL EN+GN PE+
Sbjct: 843 KKEKDKEKEKEEKITIDSSQSEILTSAKTLSSIMTKLIKPAENDGNSTAN-ATINVRPEI 901
Query: 598 LQRRQKQI 621
+ Q ++
Sbjct: 902 VADVQMEL 909
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEV 597
KK + + +E E+KIT+ T + S KL EN+GN PE+
Sbjct: 843 KKEKDKEKEKEEKITIDSSQSEILTSAKTLSSIMTKLIKPAENDGNSTAN-ATINVRPEI 901
Query: 598 LQRRQKQI 621
+ Q ++
Sbjct: 902 VADVQMEL 909
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 430 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENE 549
L+HEE+E K T+TD M D + +L + +E E
Sbjct: 822 LKHEENELKKTITDMGMRLNEAKKSDEFLKSELSTALEEE 861
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 418 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSD 537
KK+ + EE EDK K +S S E++K RK + +
Sbjct: 103 KKKNKDSEEEEDKKKDKKKKNDSSDESEEENKKRKNKRKN 142
>Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.18 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 453 VLRFFMFKSPFFITACHSFTELYLSF 376
+L FF K PFF A H FT Y +F
Sbjct: 147 ILDFFTGKKPFFNDAGHIFTYFYDAF 172
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 442 ESEDKITVTDKSMNSRTHSGEDSKNRKKLK--SDVENEGNLVVKLVEYET--DPEVLQ 603
E ++ + +TD+++ +R E +KN +K+ + GN+++K +T EV+Q
Sbjct: 394 ELDEPLEITDQTVETRFFELETTKNLEKINRGTTTSEHGNILIKTTASQTPVSQEVVQ 451
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 442 ESEDKITVTDKSMNSRTHSGEDSKNRKKLK--SDVENEGNLVVKLVEYET--DPEVLQ 603
E ++ + +TD+++ +R E +KN +K+ + GN+++K +T EV+Q
Sbjct: 394 ELDEPLEITDQTVETRFFELETTKNLEKINRGTTTSEHGNILIKTTASQTPVSQEVVQ 451
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 433 EHEESEDKITVTDKSMNSRTHSGEDSKNR-KKLKSDVENEGNLVVKL-VEYETDPEVLQR 606
E E S+D+ + RT GED + + D + +G + K ++++DPE++++
Sbjct: 22 EGEASDDEEIAVKDDLKKRTPRGEDEADEDDEADEDEDEDGEDLGKYNFDFDSDPELVEK 81
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 433 EHEESEDKITVTDKSMNSRTHSGEDSKNR-KKLKSDVENEGNLVVKL-VEYETDPEVLQR 606
E E S+D+ + RT GED + + D + +G + K ++++DPE++++
Sbjct: 148 EGEASDDEEIAVKDDLKKRTPRGEDEADEDDEADEDEDEDGEDLGKYNFDFDSDPELVEK 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,918,101
Number of Sequences: 27780
Number of extensions: 289525
Number of successful extensions: 931
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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