Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D21
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   7.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   7.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   7.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +2

Query: 95  VIFKA*LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSK 271
           ++F+  L  S  T+   Q++ S        G G+D  E    E    GD  S  A  S+
Sbjct: 654 LLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESE 712


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 284  TELSVCCRERSE 249
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 284  TELSVCCRERSE 249
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 284  TELSVCCRERSE 249
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 284  TELSVCCRERSE 249
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 51  IPLRPNGLRRNFSPKLF 101
           I +R NGL  NF+ K +
Sbjct: 40  INIRKNGLNYNFTKKCY 56


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 342 DHHRGPAPRH-SEKHSASEADRAERLLPGA 256
           D HR   PRH  E+H    A  +  ++P A
Sbjct: 252 DDHRDRPPRHFHEEHDTRRAS-SRGIIPRA 280


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 382 TPPGGAEP*AGTSGPPQRP 326
           +P G   P   + GPP  P
Sbjct: 109 SPSGNVPPLTPSPGPPSHP 127


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 389 AGHPSGRCRAVSRDIRTTTEAR 324
           AG+P+G  R   R+  T T A+
Sbjct: 59  AGYPAGNQRKQRRERTTFTRAQ 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,658
Number of Sequences: 336
Number of extensions: 2158
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)