Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D19
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.45 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +3

Query: 201 LLSNRFGEDEEA 236
           +LSNRFGE+EEA
Sbjct: 138 ILSNRFGENEEA 149


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 274 D*ILYQSRTNPSGT*TGKLMRL*EKDPKPSSKDRTLLSIE 393
           D I Y+S TNPS   +GK + +      P+  D TL  I+
Sbjct: 50  DKIRYESLTNPSRLDSGKELYI---KIIPNKNDGTLTIID 86


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 272 PIKFFTNREPTLLVPELESL*GSKKKTPNL 361
           P+K        L +  LESL    + TP +
Sbjct: 107 PVKIMLQNATDLFIKSLESLKPGNQSTPGI 136


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 139 KPKDRFTLASVP*GIQPWRLICYRT 213
           KP+ R TL     GIQP+  + + T
Sbjct: 453 KPRQRGTLEGNNMGIQPYDSLLWHT 477


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 310 QKGWFSIGKEFNRLIRL 260
           +K W ++  ++NRL  L
Sbjct: 261 EKSWIALNDDYNRLCHL 277


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/35 (22%), Positives = 14/35 (40%)
 Frame = +3

Query: 288 PIENQPFWYLNWKAYEALRKRPQTFQQRPNTFIDR 392
           P +  P W++ W   +  R  P       +T + R
Sbjct: 13  PPQEMPTWFVRWLNSQQPRNVPNFAAPSTSTAVQR 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,465
Number of Sequences: 336
Number of extensions: 3643
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)