Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D18
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.61 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 139 YFYFHVFINLSVVSIQVASKVVILLKYFVYYFNICVIVGLL 261
           Y+++  FI  ++  +     +++L  Y+ YY  I   V LL
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLL 253


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 305 KFVGVLISHHFCCSGY 352
           +FVG+  S +FC  GY
Sbjct: 249 QFVGIFCSLYFCIFGY 264


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 305 KFVGVLISHHFCCSGY 352
           +FVG+  S +FC  GY
Sbjct: 74  QFVGIFCSLYFCIFGY 89


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 159 YKFECSQHSSCIQGCYSIKIFCLLF*H 239
           Y++ C   S   + C+S+KI    + H
Sbjct: 285 YRYSCRDCSYATKYCHSLKIHLRRYGH 311


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 159 YKFECSQHSSCIQGCYSIKIFCLLF*H 239
           Y++ C   S   + C+S+KI    + H
Sbjct: 43  YRYSCRDCSYATKYCHSLKIHLRRYGH 69


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 296 NPIKFVGVLISHHFCCSGYRKFK 364
           NP +F+   +   F C+ + KF+
Sbjct: 430 NPARFLQKAMDFPFICNSFTKFE 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,022
Number of Sequences: 336
Number of extensions: 2829
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)