Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D17
         (545 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4EL09 Cluster: Putative uncharacterized protein; n=1; ...    34   1.9  
UniRef50_A6H251 Cluster: Probable TonB-dependent outer membrane ...    33   3.3  
UniRef50_A0Q0B9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_A4VEJ4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.5  
UniRef50_Q0YI37 Cluster: Putative uncharacterized protein; n=1; ...    32   9.9  

>UniRef50_Q4EL09 Cluster: Putative uncharacterized protein; n=1;
           Listeria monocytogenes str. 4b H7858|Rep: Putative
           uncharacterized protein - Listeria monocytogenes str. 4b
           H7858
          Length = 71

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 491 FFYFHLVHYYLAANPLHVFVYVQYLSIGYILIHLPETFKNNIKFV 357
           F YF   H +L+ NPL V  YV +++I   L      FK ++ F+
Sbjct: 27  FLYFRCRHAFLSTNPLMVLEYVTFITIAIHLGVYFSEFKKSLTFI 71


>UniRef50_A6H251 Cluster: Probable TonB-dependent outer membrane
           receptorprecursor; n=1; Flavobacterium psychrophilum
           JIP02/86|Rep: Probable TonB-dependent outer membrane
           receptorprecursor - Flavobacterium psychrophilum (strain
           JIP02/86 / ATCC 49511)
          Length = 732

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -1

Query: 464 YLAANPLHVFVYVQYLSIGYILIHLPETFKNNIKFVNSFLGCCELMCRQYH 312
           Y   N +++FV +QY ++GY    +P     N+ F+N   G   L+    H
Sbjct: 446 YKVVNKINLFVDLQYRNVGYKANFVPALVNENLNFLNPKAGITYLLNNNNH 496


>UniRef50_A0Q0B9 Cluster: Putative uncharacterized protein; n=1;
           Clostridium novyi NT|Rep: Putative uncharacterized
           protein - Clostridium novyi (strain NT)
          Length = 147

 Score = 32.7 bits (71), Expect = 5.7
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -1

Query: 503 QIILFFYFHLVHYYLAANPLHVFVYVQYLSIGYILIHLPETFKNNIKFVNSFL 345
           + I  F F  + YY ++NPL +F+++ Y  I Y  + +    + +I F+ S +
Sbjct: 19  KFIPIFLFSAMQYYQSSNPLCIFLHLSYHKISYSSLLITLWSRCDILFIPSLV 71


>UniRef50_A4VEJ4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 342

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
 Frame = -1

Query: 491 FFYFHLVHYYLAANPLHVFV--YVQYLSIGYILIHLPETFKNNIKFVNSFLGCCEL--MC 324
           FF  + + Y++     ++    Y + ++  + + ++ +TFK +I +++    CC+L   C
Sbjct: 146 FFQAYKIKYFICLYNFNLLQNKYNEQIN-NFNIFYIKKTFKKSINYISQVTTCCKLAQSC 204

Query: 323 RQYHGNVLS 297
            + H N+LS
Sbjct: 205 LRAHSNLLS 213


>UniRef50_Q0YI37 Cluster: Putative uncharacterized protein; n=1;
           Geobacter sp. FRC-32|Rep: Putative uncharacterized
           protein - Geobacter sp. FRC-32
          Length = 274

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
 Frame = -1

Query: 497 ILFFYFHLVHYYLAANPLHVFVYVQYLSIGYILIHL-PETFKNNIKFV--NSFLGCCELM 327
           + FF ++LV   +  N +H+ +  Q L  GY+ I L P  F  + K +   + L   + +
Sbjct: 21  LYFFSYNLVIGAICINVIHIIIDNQVLGPGYLKILLWPLGFYASCKIIWLKTVLTRSDFV 80

Query: 326 CRQYHGNVLSVTLLFLILTDISLTLGDRSLCR 231
           C   H NV     + +++T I+   G RS+ R
Sbjct: 81  CLSRHYNVSLSKQIPMLITKIA--SGFRSILR 110


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,117,054
Number of Sequences: 1657284
Number of extensions: 6984361
Number of successful extensions: 14642
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14627
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)