Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D15
         (446 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0882 + 32477306-32478189,32478735-32478819,32478930-324789...    34   0.045
02_02_0500 - 10993675-10994067,10994434-10995738                       33   0.14 
06_02_0244 - 13445023-13445400,13445495-13446823                       30   0.97 
04_04_1523 - 34148407-34150224                                         29   1.7  
09_04_0500 - 18120287-18122233                                         29   2.3  
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866     29   2.3  
01_06_0654 + 30911416-30912071,30913664-30914348                       27   5.2  
04_04_0362 + 24716342-24716426,24716591-24717088,24717210-24717748     27   9.1  
02_04_0446 - 22995503-22995655,22995775-22995912                       27   9.1  

>02_05_0882 +
           32477306-32478189,32478735-32478819,32478930-32478992,
           32479177-32479334,32479460-32479535,32479622-32479681,
           32479978-32480082,32480450-32480629
          Length = 536

 Score = 34.3 bits (75), Expect = 0.045
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -3

Query: 255 DYRSTIVFDNRTITVCKLIVTINYSRISTTRGPQVFINPSPRPRFLRSTTRWILG 91
           + R  +V +    T     + +  +R ST+R  +  I+PSP  RF R+ T W+ G
Sbjct: 224 EIRGEVVVEATRETTGASALVVEATRESTSRDIEHLISPSPHRRFRRTITSWLKG 278


>02_02_0500 - 10993675-10994067,10994434-10995738
          Length = 565

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 21  PQFSELVLQAETAIDNGIFPERIYQGSSGSYFVKNAGG 134
           P   E++    + I+NG  P    +GS G YF+K++ G
Sbjct: 241 PAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSG 278


>06_02_0244 - 13445023-13445400,13445495-13446823
          Length = 568

 Score = 29.9 bits (64), Expect = 0.97
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 36  LVLQAETAIDNGIFPERIYQGSSGSYFVKNAGGVRDL 146
           ++  A   ++NG  P    +GS G YF+++A G +++
Sbjct: 254 MISSAIAGLENGYLPVMSAEGSGGVYFMQDASGEKNI 290


>04_04_1523 - 34148407-34150224
          Length = 605

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 36  LVLQAETAIDNGIFPERIYQGSSGSYFVKNAGGVR 140
           LV    TAI +G+ P  I  G  GSY+ +N  G R
Sbjct: 137 LVDDVVTAIRSGVDPVPIGSGLGGSYYFRNISGDR 171


>09_04_0500 - 18120287-18122233
          Length = 648

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 24  QFSELVLQAETAIDNGIFPERIYQGSSGSYFVKNAGGVR 140
           +  +L      AI NG+ P  +  G  G+Y+ KN  G R
Sbjct: 133 RMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIYGER 171


>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
          Length = 785

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 3   PFQCDXPQFSELVLQAETAIDNGIFPERIYQGSSGSYFVKNAGG 134
           P +C   +  +LV     AI NG+ P  +  G  G+Y+ +N+ G
Sbjct: 276 PSRCSRTK--QLVKDVARAIRNGVDPIPVNSGLGGAYYFRNSKG 317


>01_06_0654 + 30911416-30912071,30913664-30914348
          Length = 446

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3

Query: 252 YRSTIVFDNRTITVCKLIVTINYSRISTTRGPQVFINPSPRP 127
           YR  +VFD+   T C   V I  S IST RG Q  I+P+  P
Sbjct: 330 YRLELVFDSGP-TECA--VPIAESSISTKRGGQFVIDPATFP 368


>04_04_0362 + 24716342-24716426,24716591-24717088,24717210-24717748
          Length = 373

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 169 YPGTTSIYKSLTPPAFFTKYDPLDPWYILS 80
           +P T+  +  L PP     Y PL PW ILS
Sbjct: 210 FPNTS--WGVLVPPMDEDDYSPLSPWTILS 237


>02_04_0446 - 22995503-22995655,22995775-22995912
          Length = 96

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -3

Query: 63 QWPSPPVVPA 34
          QWPSPP++PA
Sbjct: 10 QWPSPPLIPA 19


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,766,616
Number of Sequences: 37544
Number of extensions: 197516
Number of successful extensions: 533
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)