Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D15
         (446 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   4.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.1  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 222 FYCQRLLYFYNHRLRQDYN 278
           F+ QRLLY Y      D N
Sbjct: 276 FHVQRLLYVYEDSTYDDIN 294


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 165 RGPQVFINPSPRPRFLRSTTRWI 97
           RGP   + P  R  F  S+  W+
Sbjct: 28  RGPSFVMEPPSRVEFSNSSGAWL 50


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 165 RGPQVFINPSPRPRFLRSTTRWI 97
           RGP   + P  R  F  S+  W+
Sbjct: 28  RGPSFVMEPPSRVEFSNSSGAWL 50


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 322 NLTTDYKKSLSINSFSL 372
           NL   Y+KSL++ +FSL
Sbjct: 305 NLMVFYEKSLALAAFSL 321


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 238 YCTSIITDFAKTTI 279
           +C +I+T + KT I
Sbjct: 289 FCVNIVTSYCKTCI 302


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 158 HKYL*IPHPARVFYEV 111
           HK + IP   + FYE+
Sbjct: 528 HKLIEIPEDLKYFYEI 543


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 158 HKYL*IPHPARVFYEV 111
           HK + IP   + FYE+
Sbjct: 528 HKLIEIPEDLKYFYEI 543


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,869
Number of Sequences: 438
Number of extensions: 2639
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)