Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_D13
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 325 2e-89
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 325 2e-89
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 325 2e-89
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 325 2e-89
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 240 9e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 240 9e-64
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 131 5e-31
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 131 5e-31
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.7
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 5.1
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 325 bits (799), Expect = 2e-89
Identities = 147/237 (62%), Positives = 172/237 (72%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 207
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 208 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 387
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 388 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHXXXXXXXXXXXXAHIMEIQL 567
WQDE G+K IE DF K+ +YCS +RVIAH AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 568 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPR
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPS 260
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 325 bits (799), Expect = 2e-89
Identities = 147/237 (62%), Positives = 172/237 (72%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 207
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 208 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 387
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 388 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHXXXXXXXXXXXXAHIMEIQL 567
WQDE G+K IE DF K+ +YCS +RVIAH AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 568 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPR
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPS 260
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 325 bits (799), Expect = 2e-89
Identities = 147/237 (62%), Positives = 172/237 (72%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 207
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 208 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 387
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 388 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHXXXXXXXXXXXXAHIMEIQL 567
WQDE G+K IE DF K+ +YCS +RVIAH AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 568 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPR
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPS 260
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 325 bits (799), Expect = 2e-89
Identities = 147/237 (62%), Positives = 172/237 (72%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 207
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 208 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 387
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 388 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHXXXXXXXXXXXXAHIMEIQL 567
WQDE G+K IE DF K+ +YCS +RVIAH AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 568 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPR
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPS 260
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 240 bits (587), Expect = 9e-64
Identities = 104/160 (65%), Positives = 124/160 (77%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 207
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 208 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 387
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 388 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAH 507
WQDE G+K IE DF K+ +YCS +RVIAH
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAH 165
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPS 212
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 640 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
V A +MID I SRWHTKKLPR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR 194
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 240 bits (587), Expect = 9e-64
Identities = 104/160 (65%), Positives = 124/160 (77%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 207
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 208 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 387
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 388 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAH 507
WQDE G+K IE DF K+ +YCS +RVIAH
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAH 165
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPS 212
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 640 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
V A +MID I SRWHTKKLPR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR 194
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 131 bits (317), Expect = 5e-31
Identities = 62/106 (58%), Positives = 71/106 (66%)
Frame = +1
Query: 421 WQDELGRKSIEKDFKKMIRYCSVVRVIAHXXXXXXXXXXXXAHIMEIQLNGGTIEDKVKW 600
WQDE G+K IE DF K+ +YCS +RVIAH AH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 601 AREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
AREHLEK + VD+VFAQDEMID I SRWHTKKLPR
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 114
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPS 162
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 131 bits (317), Expect = 5e-31
Identities = 62/106 (58%), Positives = 71/106 (66%)
Frame = +1
Query: 421 WQDELGRKSIEKDFKKMIRYCSVVRVIAHXXXXXXXXXXXXAHIMEIQLNGGTIEDKVKW 600
WQDE G+K IE DF K+ +YCS +RVIAH AH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 601 AREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 738
AREHLEK + VD+VFAQDEMID I SRWHTKKLPR
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 28 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 114
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 725 RSYPVKTHKGLXKVACIGAWHPS 793
+ P KTHKGL KVACIGAWHPS
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPS 162
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 253 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 381
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 234 GCHHHRDSSDGLCRCCWIH*DPSWTTRSFDCLGGAYV*RLSTSLLQKLVQMQEEGF 401
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,803,631
Number of Sequences: 27780
Number of extensions: 400777
Number of successful extensions: 1034
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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