Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D09
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.1  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 108 CGKRERSNGNAGIHSTVYTKRSTTR*LHQ 194
           CG+   + GN   H  V+  +   R LHQ
Sbjct: 168 CGRAFTTKGNLKTHMGVHRAKPPMRVLHQ 196


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +1

Query: 577 MTADRLLVDFKLRNSXFKV 633
           + +DRL++D+K + +  K+
Sbjct: 760 LQSDRLMIDYKTQKTGSKI 778


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 276 NKERFHRRKLQIRQALCQVRTEVVER 199
           N+    RR+++I  ALC     +V +
Sbjct: 242 NRYLTRRRRIEIAHALCLTNKNLVSK 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,808
Number of Sequences: 336
Number of extensions: 3031
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)