Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D05
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.36 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.61 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.84 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 698 KLFTYSKCFIVCLLCFIIFLFSIQTVAFLF*CWNQIYSLLY 576
           K +  ++ FI C L F+I L+    + F+  C N  +  LY
Sbjct: 125 KSYKRTQIFITCELFFVILLWISFFLNFMLHCNNTTWRCLY 165


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -2

Query: 695 LFTYSKCFIVCLLCFIIFLFSIQTVAFLF 609
           +FT    F++C+  F++ LF +  + + +
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 22.2 bits (45), Expect(2) = 0.61
 Identities = 23/87 (26%), Positives = 33/87 (37%)
 Frame = -2

Query: 380 YKGICIYQLFFYHKTRDFSNGHHFNYSLPYFKFEFMT*YQHHRLLFTYFSTIVN*YSFLA 201
           Y   C+   F  H      +G+   + L Y  F   T    H LL TY+      Y+F+ 
Sbjct: 57  YYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFT---VHFLLCTYYFY----YAFII 109

Query: 200 KFPCLKVEVNLASFSNGNIFLTCMYYF 120
                        F+   +FL C+YYF
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 146 IFLTCMYYFFN 114
           +FL C+YYF++
Sbjct: 207 LFLPCIYYFYS 217



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 146 IFLTCMYYFF 117
           +FL C+YYF+
Sbjct: 280 LFLLCIYYFY 289



 Score = 21.0 bits (42), Expect(2) = 0.61
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 143 FLTCMYYFF 117
           FL C+YYF+
Sbjct: 142 FLLCIYYFY 150


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +1

Query: 616 KATVCMEKRNMMKQRRHTMKHLLYVNNL*SGKEKV 720
           + T+ +EK N +++    + H+L +N + +  EK+
Sbjct: 486 RMTINLEKSNFIQKEVKFLGHILTINGIKADPEKI 520


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 299 DCS*NDGHWRSL*FCGKKRVGICISLCI 382
           DC   DG+ RS+    +K  G  + +C+
Sbjct: 87  DCIPGDGNKRSIIVVNRKMPGPSVEVCL 114


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 266 YQHHRLLFTY 237
           YQH  LLFTY
Sbjct: 227 YQHQPLLFTY 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,066
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)