Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D05
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29488-9|AAA68778.1|  342|Caenorhabditis elegans Hypothetical pr...   132   2e-31
AF043693-3|AAB97537.1|  207|Caenorhabditis elegans Hypothetical ...    36   0.039
AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine re...    31   0.85 
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U23411-2|AAC46731.2|  471|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z67755-4|CAA91757.1|  336|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine re...    29   3.4  
Z72505-2|CAA96609.1|  340|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U41007-3|AAA82267.1|  297|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z46794-2|CAA86774.1|  950|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U29488-9|AAA68778.1|  342|Caenorhabditis elegans Hypothetical
           protein C56C10.10 protein.
          Length = 342

 Score =  132 bits (320), Expect = 2e-31
 Identities = 82/237 (34%), Positives = 128/237 (54%), Gaps = 23/237 (9%)
 Frame = +3

Query: 93  MXXSAPIVKKIIHTGQ-KYVPITKGSKVYFHFQTW------KLGQERVL-------IDDS 230
           M   A +VK+ I  G+ K      G+K  FH+Q        + GQ   L       IDD+
Sbjct: 1   MSVRATVVKRTISGGKGKISEYCDGTKAVFHYQALFPIEKHEKGQPLSLEKDAFKSIDDT 60

Query: 231 RKI---GKKEPMVLVLGHKFKLEVWETVVKMMAIGEVSSFVVKKELVYAYPFVSKTLREL 401
           RK    G  +P+ +V G KF+L V+E  +K M + E+S F V+   +  YPFVSK LR+L
Sbjct: 61  RKPWPHGYGKPLEIVFGKKFQLPVFEQCLKTMLVDEISQFDVECIDLVQYPFVSKKLRDL 120

Query: 402 GQ------SQQKVKHTCTMTLHTEGIGYKDLDEIITKPCDLEFIIELLKVEHSDEYEREM 563
            +      S     H C  ++  +G GY++LDE++  P  L F+  LL+V   D+Y  + 
Sbjct: 121 VKPCDGKHSHAHTTHMCAASI-AQGTGYEELDELMKNPRPLRFVFHLLQVFEPDQYVHDS 179

Query: 564 WQLSIQERIDLIPTLKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEXWI 734
           WQL   +++  +  L++KGN L+ +K Y EA +AY +AL   + L++RE+ G+  W+
Sbjct: 180 WQLDEDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWV 236


>AF043693-3|AAB97537.1|  207|Caenorhabditis elegans Hypothetical
           protein C34B2.5 protein.
          Length = 207

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 12/37 (32%), Positives = 26/37 (70%)
 Frame = +3

Query: 579 QERIDLIPTLKEKGNSLYGEKKYDEAEEAYNEALAIC 689
           +++I  + +LK++GN+ +   ++++A E Y EA+A C
Sbjct: 12  EDQITKVDSLKKEGNNFFANGEFEKANEKYQEAIASC 48


>AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine
           receptor, class x protein9 protein.
          Length = 309

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 725 FITFSFPDHKLFTYSKCFIVCLLCFIIFLFSIQTVAFLF*C 603
           F+  +F +H +FT++K  ++  +     LFS     +LF C
Sbjct: 109 FLVITFNNHNIFTFNKTMLMMTVLISAALFSAACAQYLFPC 149


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +3

Query: 111 IVKKIIHTGQKYVPITKGSKVYFHFQ-TWKLGQERVLIDDSRKIGKKEPMVLVLGHKFKL 287
           ++K I   GQ  V  T G+ V  H+  T + G +    D SR  G +    L  G+  K 
Sbjct: 16  VLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTK---FDSSRDRGDQFSFNLGRGNVIK- 71

Query: 288 EVWETVVKMMAIGEVSSFVVKKELVY 365
             W+  V  M  GEV+ F ++ +  Y
Sbjct: 72  -GWDLGVATMTKGEVAEFTIRSDYGY 96


>U23411-2|AAC46731.2|  471|Caenorhabditis elegans Hypothetical
           protein T25E4.2 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = -2

Query: 389 CFRYKGICIY----QLFFYHKTRDFSN-GHHFNYSLPYFKFEF 276
           CF + GI I     ++ F+  T++F+  GH +NY L  F++ F
Sbjct: 396 CFIFYGIAIIVFILEIIFHRMTKNFTFFGHSYNYHLSGFEWRF 438


>Z67755-4|CAA91757.1|  336|Caenorhabditis elegans Hypothetical
           protein F54F7.4 protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -2

Query: 725 FITFSFPDHKLFTYSKC--FIVCLLCFIIFLFSIQTVAFLF*CWNQIYSL 582
           F  F    H L     C  ++V L+  I+F+F +Q    L  C+N IY+L
Sbjct: 30  FTEFYSMTHILHLCQCCVSYLVILVASILFVFKMQVWILLVCCFNLIYAL 79


>AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 32 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 692 FTYSKCFIVCLLCFIIFLFSIQTVAFLF 609
           FT   CF  CLL +IIF+     V  LF
Sbjct: 48  FTMDICFSTCLLVYIIFVILTMEVPHLF 75


>Z72505-2|CAA96609.1|  340|Caenorhabditis elegans Hypothetical
           protein C50C10.3 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 206 LAKFPCLKVEVNLASFSNGNIFLTCMYYFF 117
           L K+   K+ +N AS  + NIF+T M+YFF
Sbjct: 49  LMKYRTAKMMMNTASM-DPNIFVTIMFYFF 77


>U41007-3|AAA82267.1|  297|Caenorhabditis elegans Hypothetical
           protein C33H5.8 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 576 IQERIDLIPTLKEKGNSLYGEKKYDEAEEAYNEAL 680
           + E   +   LKE+GN  + +KKY +A   Y+++L
Sbjct: 1   MDEEKKIAQRLKEQGNEAFKKKKYHKAMTIYSKSL 35


>AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical
           protein Y25C1A.5 protein.
          Length = 971

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/99 (24%), Positives = 44/99 (44%)
 Frame = +3

Query: 315 MAIGEVSSFVVKKELVYAYPFVSKTLRELGQSQQKVKHTCTMTLHTEGIGYKDLDEIITK 494
           +A+  VSS  V+  +++    ++KT  E      K +     TLH   I + D+   I  
Sbjct: 344 LALDLVSSRNVEDMVMFLKKEINKTATESNDENGKYRQELVKTLHAATIKFPDVASTIV- 402

Query: 495 PCDLEFIIELLKVEHSDEYEREMWQLSIQERIDLIPTLK 611
           P  +EF+ +    E +  Y  +     ++E +  +P LK
Sbjct: 403 PVLMEFLSD--TNEKASSYVLQF----VREAVHKLPNLK 435


>Z46794-2|CAA86774.1|  950|Caenorhabditis elegans Hypothetical
           protein R06F6.2 protein.
          Length = 950

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 618 GNSLYGEKKYDEAEEAYNEALAICEQLMIRER 713
           GN LYG+  Y+ A + Y E + + E   + +R
Sbjct: 391 GNYLYGKGDYENAIQQYKETIGMLEPSYVMKR 422


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,883,202
Number of Sequences: 27780
Number of extensions: 335812
Number of successful extensions: 1035
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)