Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D02
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.17 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.51 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.88 
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   8.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 471 IHLFGMEVSNQKADMVPINWFPP*YNEVFSSHHHEPHKFFTKNFLYLIR 325
           I +F ++++N++ +     +FP  Y  VFS       +   KNF + +R
Sbjct: 329 IEMFSLQIANEQVEFNAAGFFPINYTLVFSVLKQYVMQQQVKNFRHSVR 377



 Score = 26.6 bits (56), Expect = 0.22
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 471  IHLFGMEVSNQKADMVPINWFPP*YNEVFSS 379
            I +F +++ N++A      +FP  Y   FSS
Sbjct: 957  IEMFSLQILNERAGFTAAGFFPIDYTSAFSS 987



 Score = 25.4 bits (53), Expect = 0.51
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 471  IHLFGMEVSNQKADMVPINWFPP*YNEVFS 382
            I +F +++ N++A+     +FP  Y  VFS
Sbjct: 1059 IEMFSLQILNERAEFNAAGFFPIDYTLVFS 1088



 Score = 25.0 bits (52), Expect = 0.67
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 471 IHLFGMEVSNQKADMVPINWFPP*YNEVFS 382
           I +F +++ N++A      +FP  Y+ VFS
Sbjct: 681 IEMFSLQILNERAGFSAAGFFPIDYSLVFS 710


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 471 IHLFGMEVSNQKADMVPINWFPP*YNEVFS 382
           I +F +++ N++A+     +FP  Y  VFS
Sbjct: 340 IEMFSLQILNERAEFNAAGFFPIDYTLVFS 369


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 471 IHLFGMEVSNQKADMVPINWFPP*YNEVFS 382
           I +F ++++N++ +     +FP  Y  VFS
Sbjct: 360 IEMFSLQIANEQVEFNAAGFFPINYTLVFS 389


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 197 RRSKLEQAKNFYSILLLFQEILMKKY 274
           R  K  + K    IL L QEI+ K Y
Sbjct: 35  RLCKKHKTKKPVQILALLQEIIPKSY 60


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 197 RRSKLEQAKNFYSILLLFQEILMKKY 274
           R  K  + K    IL L QEI+ K Y
Sbjct: 35  RLCKKHKTKKPVQILALLQEIIPKSY 60


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 81  IFYNGCNFKTVSNSGASHAHCRYVLRTLFIPSCR 182
           I+   C +  VSNS + ++       T  I SCR
Sbjct: 36  IYEPSCQYSPVSNSDSENSEVSSNSYTPKIKSCR 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,759
Number of Sequences: 336
Number of extensions: 3530
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)