Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D01
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0197 - 26297917-26299839                                         28   6.7  
12_01_0441 + 3484003-3484374,3485071-3485151,3485242-3485514,348...    28   8.8  

>05_06_0197 - 26297917-26299839
          Length = 640

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 440 LCELENNIKTLINKMSRDKSVWFAEEILLDAKLI 541
           +   E  +K  I + S DKS+  A++ILLD K++
Sbjct: 473 IASYEALLKAYIGEASLDKSIDIAKDILLDEKVV 506


>12_01_0441 +
           3484003-3484374,3485071-3485151,3485242-3485514,
           3485695-3485826,3485903-3486076,3486164-3486393,
           3486562-3486679,3486717-3486743,3486948-3487079,
           3487189-3487323,3487393-3487599,3487772-3487936
          Length = 681

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +2

Query: 422 FVSFADLCELENNIKTLINKMSRDKSVWFAEEILLDAKLINFQLESGEWDAVEEMLRAEA 601
           +  F DLC+    +K ++  +S+       E+  + AK+   +L S  W     ++ A  
Sbjct: 605 YTDFVDLCQKPEAVKEVLGSLSKAAKQARLEKFEIPAKI---KLISEPWTPESGLVTAAL 661

Query: 602 QLSRDV 619
           +L R+V
Sbjct: 662 KLKREV 667


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,817,259
Number of Sequences: 37544
Number of extensions: 284956
Number of successful extensions: 584
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)