Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_D01
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   5.2  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   5.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 607 KLGFRSEHLLNGIPFT*LQLKVYQFSI 527
           KLG R   ++ GIP + L+ KVY+ ++
Sbjct: 607 KLGTRRAAVIYGIPRSTLRNKVYKLAM 633


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = -3

Query: 278 NTNIGIKYLHETREIQFGFQFSVKLLTDTVFYFFRLFMYRSRTSSI*YRNYGEI 117
           NTN   KY+ E  + ++   + ++ +    +Y++   M     SS  Y    EI
Sbjct: 203 NTNYSSKYMREYNDPEYKLDYFMEDVELNAYYYYMREMLPYWMSSSQYHMPKEI 256


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 363 VGTCFGFSSTNVNRFVPK 310
           VGT FG+  T VN  + K
Sbjct: 279 VGTIFGYQGTYVNLVIVK 296


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 659 TLRLIAEVLHIMHLDVE 709
           T R IAE LH+ H  +E
Sbjct: 85  TTREIAEKLHVSHTCIE 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,117
Number of Sequences: 438
Number of extensions: 4010
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)