Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C24
         (813 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   2.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   4.8  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           24   6.4  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         24   6.4  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = -2

Query: 182 IYCYVNPAXXXXXXXLYVVKYSSFFLRHFDVYRYEILIIS 63
           IYC+V+P+          + +   FL HF ++ +     S
Sbjct: 35  IYCFVSPSCLECSSVPLFINFIFMFLLHFVLFSFSFPFFS 74


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 585 LVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKSLRNGIW 713
           ++++   K    ++L  NT+  + A  LL +E  A    NG W
Sbjct: 3   ILQININKCRIAQDLALNTMRVEKADVLLLSELYAVPQNNGNW 45



 Score = 23.4 bits (48), Expect = 8.5
 Identities = 13/68 (19%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +3

Query: 249 ASKVPDHFIR-NHEPLKGLYAGVQHSPVRVLVNHKAPIYLPLWHSSKPPLPVKLWGIEVV 425
           A   P+H      E ++ ++A ++H  +++       + +       P +P+++ G+E+ 
Sbjct: 671 AGTTPEHAAAVAEEAVERVHAWMRHH-LQLAPEKTECVMISSLRRGHPEIPIRVGGLEIR 729

Query: 426 SGNAVNWL 449
           S  A+ +L
Sbjct: 730 SKQAIRYL 737


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 24  WIENIDELIYESLRNYENFVSVDIKMS 104
           W E ++E   E L+NY +F+ + I  S
Sbjct: 27  WDEQMNEAAREFLKNYSDFIPMLIGQS 53


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 24  WIENIDELIYESLRNYENFVSVDIKMS 104
           W E ++E   E L+NY +F+ + I  S
Sbjct: 27  WNEQMNEAAREFLKNYPDFIPMLIGQS 53


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +3

Query: 408 WGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVS--TVLLHLPQPKSKDVQTLDIGK 581
           W +   +G   N+L+      Q  ++    D DD     TV++ L Q   +  +  ++G 
Sbjct: 95  WAVGTTAGGCRNYLDTFWHNPQYVIRLDDPDEDDEEGNCTVIIALLQKNRRSRR--NMGV 152

Query: 582 KLVELGFA 605
           + + +GFA
Sbjct: 153 ECLTIGFA 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,561
Number of Sequences: 2352
Number of extensions: 18129
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)