Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_C20
(766 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10678-1|AAA03022.1| 140|Homo sapiens profilin II protein. 36 0.12
BC095444-1|AAH95444.1| 140|Homo sapiens profilin 2 protein. 36 0.12
BC043646-1|AAH43646.1| 140|Homo sapiens profilin 2 protein. 36 0.12
BC018049-1|AAH18049.1| 140|Homo sapiens profilin 2 protein. 36 0.12
AF228738-1|AAG24949.1| 140|Homo sapiens profilin IIa protein. 36 0.12
BC008596-1|AAH08596.1| 336|Homo sapiens TMEM19 protein protein. 35 0.37
AK001798-1|BAA91918.1| 298|Homo sapiens protein ( Homo sapiens ... 35 0.37
AK223148-1|BAD96868.1| 336|Homo sapiens transmembrane protein 1... 33 1.1
>L10678-1|AAA03022.1| 140|Homo sapiens profilin II protein.
Length = 140
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 106 WQSYVDKQLMASSCVTKAAIAGH-DGN-VWAKSEG--FE-ISKDEVAKIVAGFENESLLT 270
WQSYVD LM C +AAI G+ D VWA + G F+ I+ E+ IV G + E T
Sbjct: 4 WQSYVD-NLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPIEIDMIV-GKDREGFFT 61
Query: 271 SG 276
+G
Sbjct: 62 NG 63
>BC095444-1|AAH95444.1| 140|Homo sapiens profilin 2 protein.
Length = 140
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 106 WQSYVDKQLMASSCVTKAAIAGH-DGN-VWAKSEG--FE-ISKDEVAKIVAGFENESLLT 270
WQSYVD LM C +AAI G+ D VWA + G F+ I+ E+ IV G + E T
Sbjct: 4 WQSYVD-NLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPIEIDMIV-GKDREGFFT 61
Query: 271 SG 276
+G
Sbjct: 62 NG 63
>BC043646-1|AAH43646.1| 140|Homo sapiens profilin 2 protein.
Length = 140
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 106 WQSYVDKQLMASSCVTKAAIAGH-DGN-VWAKSEG--FE-ISKDEVAKIVAGFENESLLT 270
WQSYVD LM C +AAI G+ D VWA + G F+ I+ E+ IV G + E T
Sbjct: 4 WQSYVD-NLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPIEIDMIV-GKDREGFFT 61
Query: 271 SG 276
+G
Sbjct: 62 NG 63
>BC018049-1|AAH18049.1| 140|Homo sapiens profilin 2 protein.
Length = 140
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 106 WQSYVDKQLMASSCVTKAAIAGH-DGN-VWAKSEG--FE-ISKDEVAKIVAGFENESLLT 270
WQSYVD LM C +AAI G+ D VWA + G F+ I+ E+ IV G + E T
Sbjct: 4 WQSYVD-NLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPIEIDMIV-GKDREGFFT 61
Query: 271 SG 276
+G
Sbjct: 62 NG 63
>AF228738-1|AAG24949.1| 140|Homo sapiens profilin IIa protein.
Length = 140
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 106 WQSYVDKQLMASSCVTKAAIAGH-DGN-VWAKSEG--FE-ISKDEVAKIVAGFENESLLT 270
WQSYVD LM C +AAI G+ D VWA + G F+ I+ E+ IV G + E T
Sbjct: 4 WQSYVD-NLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPIEIDMIV-GKDREGFFT 61
Query: 271 SG 276
+G
Sbjct: 62 NG 63
>BC008596-1|AAH08596.1| 336|Homo sapiens TMEM19 protein protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.37
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 124 KQLMAS-SCVTK-AAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGGVTIAGT 297
KQ AS C++ AA+A G+ WA G +SK +++ +E + T+GGVT+ G
Sbjct: 165 KQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSS-PRLITTWEKVPVGTNGGVTVVGL 223
Query: 298 RYIYLSGT 321
L GT
Sbjct: 224 VSSLLGGT 231
>AK001798-1|BAA91918.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ10936 fis, clone OVARC1000959, weakly similar to
HYPOTHETICAL PROTEIN MJ0933. ).
Length = 298
Score = 34.7 bits (76), Expect = 0.37
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 124 KQLMAS-SCVTK-AAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGGVTIAGT 297
KQ AS C++ AA+A G+ WA G +SK +++ +E + T+GGVT+ G
Sbjct: 165 KQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSS-PRLITTWEKVPVGTNGGVTVVGL 223
Query: 298 RYIYLSGT 321
L GT
Sbjct: 224 VSSLLGGT 231
>AK223148-1|BAD96868.1| 336|Homo sapiens transmembrane protein 19
variant protein.
Length = 336
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 124 KQLMAS-SCVTK-AAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGGVTIAGT 297
KQ AS C++ A+A G+ WA G +SK +++ +E + T+GGVT+ G
Sbjct: 165 KQYSASWMCLSLLVALACSAGDTWASEVGPVLSKSS-PRLITTWEKVPVGTNGGVTVVGL 223
Query: 298 RYIYLSGT 321
L GT
Sbjct: 224 VSSLLGGT 231
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,043,802
Number of Sequences: 237096
Number of extensions: 2228089
Number of successful extensions: 3296
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3296
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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