Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C19
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-22|CAB55034.1|  119|Caenorhabditis elegans Hypothetical...    73   3e-13
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec...    32   0.47 
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph...    32   0.47 
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase...    28   5.8  
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de...    28   5.8  
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF003383-3|ABO16467.1|  438|Caenorhabditis elegans Cyclophylin p...    28   5.8  
AC084160-4|AAK39374.1|  240|Caenorhabditis elegans Hypothetical ...    28   5.8  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    28   7.7  
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL110478-3|CAB54348.1|  380|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AL117195-22|CAB55034.1|  119|Caenorhabditis elegans Hypothetical
           protein Y57A10A.29 protein.
          Length = 119

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = +3

Query: 312 QPLEKRKARLHYXSRKRGMLXNDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFY 491
           + ++ ++ARL Y S+KRG+L ND+LL  FA++ L   +E +   YD+LIN    +WD+FY
Sbjct: 27  EKIDAKRARLLYQSKKRGILENDILLGDFAEQNLKKMSEPELKAYDKLINGEHMEWDLFY 86

Query: 492 WIVEKKPTPKEFDN-EIMNLLKK 557
           ++  KK  P++ ++ ++   +KK
Sbjct: 87  YLSNKKSPPEDVESCQVYQKVKK 109


>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
           receptor TOL-1 protein.
          Length = 1221

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 195 LNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLH 344
           LN+S N ++      FSS     +D +Y ++    VE  Q  EKR A LH
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLH 336


>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
           (drosophila) family protein 1 protein.
          Length = 1221

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 195 LNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLH 344
           LN+S N ++      FSS     +D +Y ++    VE  Q  EKR A LH
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLH 336


>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
            beta homolog EGL-8 protein.
          Length = 1431

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 519  KEFDNEIMNLLKKHAKNEDKIALRQP 596
            K F  E+ +L KKH K  D I  +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167


>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
            defective protein 8,isoform b protein.
          Length = 1431

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 519  KEFDNEIMNLLKKHAKNEDKIALRQP 596
            K F  E+ +L KKH K  D I  +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167


>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
            protein R10F2.1 protein.
          Length = 2779

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 216  LKNVQKVAFSSNTTNNMDTTYMEIPLYDVEKQQP 317
            ++ +  VA+SS T  +  T Y+EI  +DV+   P
Sbjct: 2511 IEQITVVAYSSPTKQSKTTVYLEIGPFDVQPSLP 2544


>AF003383-3|ABO16467.1|  438|Caenorhabditis elegans Cyclophylin
           protein 17 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +3

Query: 402 KKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPK--EFDNEIMNLLKKHAKNE 572
           KK +N F +K T   + +  + +N WD F    + KPTPK   F   +M+   K  ++E
Sbjct: 262 KKVVNTFRQKPTPAPE-VTTTKANIWDKFTVGNKAKPTPKYIPFWQRLMSTTSKPIEDE 319


>AC084160-4|AAK39374.1|  240|Caenorhabditis elegans Hypothetical
           protein Y73B3B.2 protein.
          Length = 240

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 498 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 596
           +  KP+  +FD+E MNLLK    N+ KI    P
Sbjct: 193 INPKPSQPQFDDEQMNLLKS-IINQSKIVSMMP 224


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 498 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 596
           +  KP+  +FD+E MNLLK    N+ KI    P
Sbjct: 29  INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 498 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 596
           +  KP+  +FD+E MNLLK    N+ KI    P
Sbjct: 29  INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60


>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
           protein Y87G2A.5 protein.
          Length = 1050

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 354 RKRGMLXNDLLLSTFAKKYLNGFNEKQTMMYDRLIN-SPSNDWDIFYWIVEKK 509
           R+RG+  +DL    F ++  +  NEK  ++YD+      S DWD   + ++ K
Sbjct: 181 RERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPK 233


>AL110478-3|CAB54348.1|  380|Caenorhabditis elegans Hypothetical
           protein Y26D4A.8 protein.
          Length = 380

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/71 (21%), Positives = 34/71 (47%)
 Frame = +3

Query: 129 RLSLSKIDKNNMNLIKMLHTRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYDVEK 308
           ++ + + +KN+ +++K LH     +  N   N+   A  S        ++ E  ++  +K
Sbjct: 50  KMEILEREKNSQDMLKQLHEDKKEMEGNIQSNIN--AMKSENLQYQTQSHQEKKVFAEKK 107

Query: 309 QQPLEKRKARL 341
            Q L++  A+L
Sbjct: 108 LQKLKENGAKL 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,245,385
Number of Sequences: 27780
Number of extensions: 315286
Number of successful extensions: 976
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)