Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C18
         (342 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           22   7.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   7.2  
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          21   9.6  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    21   9.6  

>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 73  RIVQIGNEXFVASNGLFE 20
           +++ IGNE F A   LF+
Sbjct: 247 QVITIGNERFRAPEALFQ 264


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 89  VWALNQDRPDWQRTLCSFQ 33
           +WA   DR   QR L SFQ
Sbjct: 797 IWAEATDRQWCQRMLASFQ 815


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 45 KXSLPIWTILIQSPYVYS 98
          K SLP W  L+Q+   +S
Sbjct: 39 KASLPDWVCLVQNESAFS 56


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1
          protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 45 KXSLPIWTILIQSPYVYS 98
          K SLP W  L+Q+   +S
Sbjct: 39 KASLPDWVCLVQNESAFS 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,062
Number of Sequences: 2352
Number of extensions: 3030
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)