Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_C18
(342 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein. 28 2.0
AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dau... 28 2.0
AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal daue... 28 2.0
Z70205-11|CAD44096.1| 409|Caenorhabditis elegans Hypothetical p... 26 6.1
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 26 6.1
Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 26 6.1
U23516-7|ABC71838.1| 63|Caenorhabditis elegans Hypothetical pr... 26 6.1
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 26 8.1
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 26 8.1
>M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein.
Length = 669
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 57 PIWTILIQSPYVYSILYRRVCWKSSPSSEMSVNTCRRR 170
P+W + ++ I+ + CW +PS+ + CR+R
Sbjct: 550 PLWKDHPEMKHIMEII--KTCWNGNPSARFTSYICRKR 585
>AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform b protein.
Length = 668
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 57 PIWTILIQSPYVYSILYRRVCWKSSPSSEMSVNTCRRR 170
P+W + ++ I+ + CW +PS+ + CR+R
Sbjct: 549 PLWKDHPEMKHIMEII--KTCWNGNPSARFTSYICRKR 584
>AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform a protein.
Length = 669
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 57 PIWTILIQSPYVYSILYRRVCWKSSPSSEMSVNTCRRR 170
P+W + ++ I+ + CW +PS+ + CR+R
Sbjct: 550 PLWKDHPEMKHIMEII--KTCWNGNPSARFTSYICRKR 585
>Z70205-11|CAD44096.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 86 IRVFDPLSQSMLEELALIRDVSKYLQKKKIE 178
+RV D LS + + L +I++VSKY + K+E
Sbjct: 88 VRVNDSLSDTFMA-LKIIKNVSKYREAAKLE 117
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 86 IRVFDPLSQSMLEELALIRDVSKYLQKKKIE 178
+RV D LS + + L +I++VSKY + K+E
Sbjct: 566 VRVNDSLSDTFMA-LKIIKNVSKYREAAKLE 595
>Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 86 IRVFDPLSQSMLEELALIRDVSKYLQKKKIE 178
+RV D LS + + L +I++VSKY + K+E
Sbjct: 88 VRVNDSLSDTFMA-LKIIKNVSKYREAAKLE 117
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 86 IRVFDPLSQSMLEELALIRDVSKYLQKKKIE 178
+RV D LS + + L +I++VSKY + K+E
Sbjct: 566 VRVNDSLSDTFMA-LKIIKNVSKYREAAKLE 595
>U23516-7|ABC71838.1| 63|Caenorhabditis elegans Hypothetical
protein B0416.7b protein.
Length = 63
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 33 LEATKXSLPIWTILIQSPYVYSI 101
LE K + WT+++ S ++YSI
Sbjct: 9 LEECKKMMDFWTVILNSKWLYSI 31
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 2 VPSTPEFEKPIGSYKXFVANLDDPDSEPIRVFDPLSQSMLEE 127
VPS + K + F L + EP++VF+ L Q MLE+
Sbjct: 381 VPSVVQLAKECKMWSAFERILKQYNFEPLKVFEEL-QKMLEK 421
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 2 VPSTPEFEKPIGSYKXFVANLDDPDSEPIRVFDPLSQSMLEE 127
VPS + K + F L + EP++VF+ L Q MLE+
Sbjct: 432 VPSVVQLAKECKMWSAFERILKQYNFEPLKVFEEL-QKMLEK 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,443,189
Number of Sequences: 27780
Number of extensions: 70060
Number of successful extensions: 243
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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