Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C15
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 124 C*WCARSAPSLKCSST 171
           C WC +S PSL   +T
Sbjct: 380 CVWCKQSFPSLAAMTT 395


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 143 DRAHHQQHRKGNKN 102
           DR H QQH + N+N
Sbjct: 297 DRKHTQQHYQMNQN 310


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 143 DRAHHQQHRKGNKN 102
           DR H QQH + N+N
Sbjct: 245 DRKHTQQHYQMNQN 258


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 143 DRAHHQQHRKGNKN 102
           DR H QQH + N+N
Sbjct: 428 DRKHTQQHYQMNQN 441


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 279 GFFNNNTGMSRHKRRDKCR 223
           G  +N+   SRH   D CR
Sbjct: 161 GEVSNSGSFSRHAHPDDCR 179


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 279 GFFNNNTGMSRHKRRDKCR 223
           G  +N+   SRH   D CR
Sbjct: 161 GEVSNSGSFSRHAHPDDCR 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,011
Number of Sequences: 336
Number of extensions: 1985
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)