Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C11
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.0  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   7.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.3  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -2

Query: 386 FTFVKGNPSIAGRFEIVANEAQSAL*STYRAIAMSLVWSGGSDLRREVISFALS 225
           FT+  GN S A  F +V  +   AL      + ++ +W+  +DL   +IS AL+
Sbjct: 188 FTYFLGNMSFAHIFALVEYDIFKALVLQTINLQITFIWT-YNDLFVMLISTALA 240


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -2

Query: 386 FTFVKGNPSIAGRFEIVANEAQSAL*STYRAIAMSLVWSGGSDLRREVISFALS 225
           FT+  GN S A  F +V  +   AL      + ++ +W+  +DL   +IS AL+
Sbjct: 188 FTYFLGNMSFAHIFALVEYDIFKALVLQTINLQITFIWT-YNDLFVMLISTALA 240


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 607 SDEYKFAKAALFERHPAMANWP 672
           SD Y+F+   L   HP ++  P
Sbjct: 219 SDFYRFSPTGLIPPHPGLSPHP 240


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 607 SDEYKFAKAALFERHPAMANWP 672
           SD Y+F+   L   HP ++  P
Sbjct: 111 SDFYRFSPTGLIPPHPGLSPHP 132


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 669 AYGSRLVHSQNENCSNSDGRLVRWSQ 746
           ++GS+ +  +   CSNS  R  R+++
Sbjct: 49  SFGSKTIDFRKIQCSNSPLRKARYTE 74


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 118 KMKWELIAFSLCCLNLYVDCDWK 186
           ++K  L  FS CC+  ++   W+
Sbjct: 5   ELKRVLFFFSFCCILFFIYLYWQ 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,709
Number of Sequences: 336
Number of extensions: 4501
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)