Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C11
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113353-1|AAM29358.1|  211|Drosophila melanogaster GH28782p pro...   122   5e-28
AE014297-2344|AAN13741.1|  211|Drosophila melanogaster CG5413-PB...   122   5e-28
AE014297-2343|AAF55414.1|  211|Drosophila melanogaster CG5413-PA...   122   5e-28
AF084522-1|AAC34860.1|  211|Drosophila melanogaster cellular rep...   120   3e-27
BT001520-1|AAN71275.1|  177|Drosophila melanogaster LP11958p pro...    85   1e-16
AE014297-2345|AAN13742.1|  173|Drosophila melanogaster CG5413-PC...    85   1e-16
AY119245-1|AAM51105.1|  486|Drosophila melanogaster SD20456p pro...    29   8.0  

>AY113353-1|AAM29358.1|  211|Drosophila melanogaster GH28782p
           protein.
          Length = 211

 Score =  122 bits (295), Expect = 5e-28
 Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
 Frame = +1

Query: 214 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 393
           +  R     I   +R    +H K+   AR ++H A+WA++ ++S    ++G+P  N+ S+
Sbjct: 24  YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80

Query: 394 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCEQNNYDPEDPRCTRL 570
            D    N STG   F ++ LDF+  D  K+++ T+L S E+T  C++   DP +P C R 
Sbjct: 81  DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140

Query: 571 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 750
           M+SG++KK+      Y+ +  A   RHPA  NW   H++++ +++I+ I ++D++GG   
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK 200

Query: 751 IPVRDYLA 774
           +   DY A
Sbjct: 201 VSASDYYA 208


>AE014297-2344|AAN13741.1|  211|Drosophila melanogaster CG5413-PB,
           isoform B protein.
          Length = 211

 Score =  122 bits (295), Expect = 5e-28
 Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
 Frame = +1

Query: 214 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 393
           +  R     I   +R    +H K+   AR ++H A+WA++ ++S    ++G+P  N+ S+
Sbjct: 24  YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80

Query: 394 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCEQNNYDPEDPRCTRL 570
            D    N STG   F ++ LDF+  D  K+++ T+L S E+T  C++   DP +P C R 
Sbjct: 81  DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140

Query: 571 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 750
           M+SG++KK+      Y+ +  A   RHPA  NW   H++++ +++I+ I ++D++GG   
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK 200

Query: 751 IPVRDYLA 774
           +   DY A
Sbjct: 201 VSASDYYA 208


>AE014297-2343|AAF55414.1|  211|Drosophila melanogaster CG5413-PA,
           isoform A protein.
          Length = 211

 Score =  122 bits (295), Expect = 5e-28
 Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
 Frame = +1

Query: 214 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 393
           +  R     I   +R    +H K+   AR ++H A+WA++ ++S    ++G+P  N+ S+
Sbjct: 24  YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80

Query: 394 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCEQNNYDPEDPRCTRL 570
            D    N STG   F ++ LDF+  D  K+++ T+L S E+T  C++   DP +P C R 
Sbjct: 81  DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140

Query: 571 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 750
           M+SG++KK+      Y+ +  A   RHPA  NW   H++++ +++I+ I ++D++GG   
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK 200

Query: 751 IPVRDYLA 774
           +   DY A
Sbjct: 201 VSASDYYA 208


>AF084522-1|AAC34860.1|  211|Drosophila melanogaster cellular
           repressor of E1A-stimulatedgenes CREG protein.
          Length = 211

 Score =  120 bits (288), Expect = 3e-27
 Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
 Frame = +1

Query: 214 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 393
           +  R     I   +R    +H K+   AR ++H A+WA++ ++S    ++G+P  N+ S 
Sbjct: 24  YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISF 80

Query: 394 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCEQNNYDPEDPRCTRL 570
            D    N STG   F ++ LDF+  D  K+++ T+L S E+T  C++   DP +P C R 
Sbjct: 81  DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140

Query: 571 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 750
           M+SG++KK+      Y+ +  A   RHPA  NW   H++++ +++I+ I + D++GG   
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVPDFYGGPHK 200

Query: 751 IPVRDYLA 774
           +   DY A
Sbjct: 201 VSASDYYA 208


>BT001520-1|AAN71275.1|  177|Drosophila melanogaster LP11958p
           protein.
          Length = 177

 Score = 85.0 bits (201), Expect = 1e-16
 Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
 Frame = +1

Query: 214 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 393
           +  R     I   +R    +H K+   AR ++H A+WA++ ++S    ++G+P  N+ S+
Sbjct: 28  YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 84

Query: 394 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCEQNNYDPEDPRCTRL 570
            D    N STG   F ++ LDF+  D  K+++ T+L S E+T  C++   DP +P C R 
Sbjct: 85  DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 144

Query: 571 MLSGKMKKV 597
           M+SG++KK+
Sbjct: 145 MISGQVKKL 153


>AE014297-2345|AAN13742.1|  173|Drosophila melanogaster CG5413-PC,
           isoform C protein.
          Length = 173

 Score = 85.0 bits (201), Expect = 1e-16
 Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
 Frame = +1

Query: 214 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 393
           +  R     I   +R    +H K+   AR ++H A+WA++ ++S    ++G+P  N+ S+
Sbjct: 24  YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80

Query: 394 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCEQNNYDPEDPRCTRL 570
            D    N STG   F ++ LDF+  D  K+++ T+L S E+T  C++   DP +P C R 
Sbjct: 81  DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140

Query: 571 MLSGKMKKV 597
           M+SG++KK+
Sbjct: 141 MISGQVKKL 149


>AY119245-1|AAM51105.1|  486|Drosophila melanogaster SD20456p
           protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = +1

Query: 403 SLANSTGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCEQNNYDPEDPRCTRLMLS 579
           ++ANS    + Y  PL+ S  ++ +N+   V++ L+       +  +P   +CT++  S
Sbjct: 140 AVANSLSSVHIYALPLELSNDEIDENADEKVVIQLDSLITLTLDINNPVQDQCTKICWS 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,580,769
Number of Sequences: 53049
Number of extensions: 832405
Number of successful extensions: 2005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)