Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_C07
(821 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 129 4e-31
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 43 6e-05
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 33 0.065
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 30 0.46
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 29 0.80
SPAC24C9.10c |mrp4||mitochondrial ribosomal protein subunit S2|S... 27 4.3
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 26 5.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 7.4
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 7.4
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 26 7.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 9.8
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 25 9.8
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 25 9.8
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 25 9.8
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 25 9.8
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 129 bits (312), Expect = 4e-31
Identities = 70/247 (28%), Positives = 129/247 (52%), Gaps = 9/247 (3%)
Frame = +1
Query: 73 PHPHSRQATSIWLLALLKNCPERFPIKNKVQELQDAFMDFLSENSDTIQDVASKGLSLVY 252
P P R+A+S+WL +++ C + ++ ++ +F+ FL D +QD AS+GL +Y
Sbjct: 857 PKPLLRRASSLWLFYIVRYCEPQTYTMTRLNDIYHSFLSFLVTQDDFVQDTASRGLKAMY 916
Query: 253 QNSDETQKKSLVGQIIEQLTSGK---RSVAQVTDDTKIFEEGQLGKAPTGGNLSTYKELC 423
+ ++KS +I + + + ++ A + DT +F + G ++TYK++C
Sbjct: 917 DVLEGDERKSFTDNLISTIAADRVDEKTKAPLDADTALFTTNK-------GTVATYKDIC 969
Query: 424 SLASDLNKPDLLYKFMHLAHHNSIWNSKKGAAFGFHSIA---SQAGAQLSEHLPR---IV 585
SLAS+ PDL+Y F+ +A ++S+W ++KG A G + Q S + ++
Sbjct: 970 SLASESGNPDLIYSFLSIAGNSSLWQARKGLASGISYLGIPEDQKRKTFSFDTSKSSSLL 1029
Query: 586 PRLYRYRFDPTPRIQTSMTSIWHAIVPNTQATVQKYHKEILDDLVXNMTSNXWRVRMACC 765
+LYR++ DP P + +M IW +VP + + + K +++D + M S WR R +
Sbjct: 1030 KKLYRFKHDPNPDVAKTMGEIWDTLVP-SDLNLASHRKYLVEDCLEFMGSRSWRDRESSV 1088
Query: 766 TALAELL 786
L LL
Sbjct: 1089 NTLVSLL 1095
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 42.7 bits (96), Expect = 6e-05
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +1
Query: 565 EHLPRIVPRLYRYRFDPTPRIQTSMTSIWHAIVPNTQATVQKYHKEILDDLVXNMTSNXW 744
E RI+ LY R D ++T IW AIV NT TV++ + +V N+ S+
Sbjct: 1861 ERHDRILSTLYIVRQDIAAVVRTPAIQIWKAIVVNTPRTVREILPTLTSIIVSNLNSSSN 1920
Query: 745 RVRMACCTALAELLRGA 795
R C +L +LL+ A
Sbjct: 1921 DRRTMCVKSLGDLLKKA 1937
Score = 29.5 bits (63), Expect = 0.60
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +1
Query: 550 GAQLSEHLPRIVPRLYRYRFDPTPRIQTSMTSIWHAIVPNTQATVQKYHKEILDDLVXNM 729
G++ +L R +P + D + +QT+ IV N AT K +L +L +
Sbjct: 1750 GSRFQPYLARAIPPILSGLADDSELVQTASLRAAKMIV-NNYAT--KSVDLLLPELEKGL 1806
Query: 730 TSNXWRVRMACCTALAELL 786
N WR+R++ + +L+
Sbjct: 1807 FDNAWRIRLSSVQLVGDLV 1825
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 496 WNSKKGAAFGFHSIASQAGAQLSEHLPRIVPRLYRYRFDPTPRIQTS 636
W SKK + ++ A QLS LP I+P+L D +++ +
Sbjct: 1495 WRSKKASVEILGLMSYMAPKQLSVFLPTIIPKLSEVLTDSHSQVRNT 1541
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1095
Score = 32.7 bits (71), Expect = 0.065
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 496 WNSKKGAAFGFHSIASQAGAQLSEHLPRIVPRLYRYRFDPTPRIQTSMTSIWHAIVPNTQ 675
W+ + A SIA A + + L R++ + DP PR++ + + + +
Sbjct: 385 WSERHAALMAISSIAEGAEKLMKKELSRVLDMVLPLLADPHPRVRWAACNAVGQMSTDFA 444
Query: 676 ATVQ-KYHKEILDDLVXNMTSNXWRVRMACCTAL 774
+Q KY IL+ LV + S RV+ A+
Sbjct: 445 PDMQVKYPSRILEALVPVLESPESRVQAHAAAAM 478
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 29.9 bits (64), Expect = 0.46
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 534 HSVASRGPAVRAPAPDSAAPVP-LPVRPHAAHTDLHDQHMARHRAQHAGHCSKIS 695
HSV R P + +P+ + PHA ++H+ + +R+ +++ C+ +S
Sbjct: 574 HSVPQNSSYPRPPMQVNRSPIDSMQTIPHANFNEMHNAYSSRYPLKYSKSCNAVS 628
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 29.1 bits (62), Expect = 0.80
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 220 DVASKGLSLVYQNSDETQKKSLVGQIIEQLTSGKRSVAQVTDDTKIFEEGQLGKAPTGGN 399
D S S Q E++ + + + +L + ++++TKI + K+P+G
Sbjct: 722 DCRSPSCSDFEQLGQESENNTSISGRVSKLVKSFNDSSSISNNTKI----SITKSPSGEK 777
Query: 400 LSTYKELCSLA-SDLNK 447
+S +KE+ +A D++K
Sbjct: 778 VSVFKEMSDIALRDMDK 794
>SPAC24C9.10c |mrp4||mitochondrial ribosomal protein subunit
S2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 263
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 433 SDLNKPDLLYKFMHLAHHNSIWN 501
S L+ P LL HL H SIWN
Sbjct: 46 SQLSLPLLLSSGAHLGHSTSIWN 68
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 26.2 bits (55), Expect = 5.6
Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Frame = +1
Query: 496 WNSKKGAAFGFHSIASQAGAQLSEHLPRIVPRLYRYRFDPTPRIQT------SMTSIWHA 657
W ++ +IA + ++LP + P P ++T S W +
Sbjct: 428 WKVQEAGVLAVGAIAEGCMDGMVQYLPELYPYFLSLLDSKKPLVRTITCWTLGRYSKWAS 487
Query: 658 IVPNTQATVQKYHKEILDDLVXNMTSNXWRVRMACCTALAEL 783
+ + + QKY +L L+ + N +V+ A C+A A L
Sbjct: 488 CLESEEDR-QKYFVPLLQGLLRMVVDNNKKVQEAGCSAFAIL 528
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 480 ASQLYLEFKERGSVRLPLHSVASRGPAVRAPAPDSAAPVPLPVR 611
+S+ Y E R P +V++ PA PAP S P+P P R
Sbjct: 14 SSRAYEEIFGAPRKREPARTVST--PAFMEPAPVSKKPLPPPTR 55
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.4
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 148 IKNKVQELQDAFMDFLSENSDTIQDVASKGLSLVYQNSDETQKKSLVGQIIEQLTSGKRS 327
I+++ Q+ +D LSEN IQD K + ++ D + K L + Q T G +
Sbjct: 593 IESQASFEQNQTLDILSENIVEIQD---KSTDPLQKSLDSSLKSHLPEATVIQNTDGSVT 649
Query: 328 VAQVTDDTKIFEEGQLG 378
V +T ++ G G
Sbjct: 650 VNSLTVYPEVIGYGSHG 666
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 481 HHNSIWNSKKGAAFGFHSIASQAGAQLSEHLPRIVPRLYRYRFDPTPRIQ 630
H WN K + + A +QLS LP+I+P + +D ++
Sbjct: 143 HTTGKWNEKMNSLQLLDVLVEVAPSQLSYSLPQIIPVVSESMWDTKAEVK 192
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Frame = +3
Query: 528 PLHSVA-----SRGPAVRAPAPDSAAPVPLPV 608
P+H+VA + G APAP SA P PV
Sbjct: 1451 PMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPV 1482
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = -1
Query: 233 LLATSCIVSLFSDKKSMNASCNSCTLFLMGKRSGQFFNKASNHILVACLE 84
L+ T I+ FS+ +S C +F K SNH+ C++
Sbjct: 502 LMFTFHIIRSFSELTKFQSSLEGCLNLAAYYEDAEFPQKLSNHLYNLCVK 551
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 25.4 bits (53), Expect = 9.8
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 145 PIKNKVQELQDAFMDFLSENSDTIQDVASKGLSLVYQNSDETQKK--SLVGQIIEQL--T 312
P KVQ D F+DFL++N + ++V K L+ E+ ++ SL I+ L
Sbjct: 75 PYVGKVQNEADEFVDFLAKNGNP-REVFLKCCELLINGGFESPQQFISLNSAILSALHRI 133
Query: 313 SGKRSVAQVTD 345
S KR V V +
Sbjct: 134 STKRPVLFVNN 144
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 82 HSRQATSIWLLALLKNCPE 138
H+ AT +W+LALL + PE
Sbjct: 291 HTSAATIVWVLALLGSKPE 309
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +3
Query: 516 SVRLPLHSVA---SRGPAVRAPAPDSAAPVPLPVRPHAAHTDLHDQHMAR 656
SV +P ++ S P + APA S PLP P A L ++ R
Sbjct: 541 SVEIPSNTTTIAPSPVPTIIAPALPSTPAPPLPSHPMATRKSLSSTNLVR 590
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.130 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,397,292
Number of Sequences: 5004
Number of extensions: 71419
Number of successful extensions: 272
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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