Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_C07
(821 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57283| Best HMM Match : HEAT (HMM E-Value=6.3) 149 3e-36
SB_45465| Best HMM Match : HEAT (HMM E-Value=0.018) 50 2e-06
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 32 0.65
SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53) 31 1.1
SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 30 2.6
SB_12722| Best HMM Match : Oxysterol_BP (HMM E-Value=1.2) 30 2.6
SB_27105| Best HMM Match : GDC-P (HMM E-Value=0) 30 2.6
SB_20006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 29 3.4
SB_9209| Best HMM Match : Pyocin_S (HMM E-Value=1.8) 29 3.4
SB_20198| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 29 3.4
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 29 4.6
SB_41489| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 29 4.6
SB_25112| Best HMM Match : HEAT (HMM E-Value=3.09999e-40) 29 6.0
SB_18876| Best HMM Match : DUF1040 (HMM E-Value=2.9) 29 6.0
SB_24356| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_20239| Best HMM Match : RanGAP1_C (HMM E-Value=3) 29 6.0
SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_57283| Best HMM Match : HEAT (HMM E-Value=6.3)
Length = 378
Score = 149 bits (361), Expect = 3e-36
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = +1
Query: 151 KNKVQELQDAFMDFLSENSDTIQDVASKGLSLVYQNSDETQKKSLVGQIIEQLTSGKRSV 330
+ ++ +Q FMD L+E D Q+VASKGL LVY+ E +++ LV +++ LT+G+
Sbjct: 67 QENLKHIQMTFMDMLAETDDLTQEVASKGLGLVYELGGEERREELVSLLVDTLTTGR--- 123
Query: 331 AQVTDDTKIFEEGQLGKAPTGGNLSTYKELCSLASDLNKPDLLYKFMHLAHHNSIWNSKK 510
G LSTYKELCSLASDLN+PDL+YKFMHLA+HN++WNS++
Sbjct: 124 --------------------SGGLSTYKELCSLASDLNQPDLIYKFMHLANHNALWNSRR 163
Query: 511 GAAFGFHSIASQAGAQLSEHLPRIVPRLYRYR 606
GAAFGF SIAS + QL +LP I+P+LYRYR
Sbjct: 164 GAAFGFSSIASHSREQLEPYLPNIIPKLYRYR 195
>SB_45465| Best HMM Match : HEAT (HMM E-Value=0.018)
Length = 301
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 682 VQKYHKEILDDLVXNMTSNXWRVRMACCTALAELLRG 792
V KY KEIL DLV N+ SN WR+R + C AL++LL G
Sbjct: 159 VDKYIKEILQDLVENLNSNLWRLRQSSCMALSDLLSG 195
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 31.9 bits (69), Expect = 0.65
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 136 ERFPIKNKVQELQDAFMDFLSENSDTIQDVASKGLSLVYQNS-DETQKKSLVGQIIEQLT 312
E+ + N Q+L+D + + E D + KG +VYQ S T +S V + +
Sbjct: 1590 EQKKVANAYQKLEDRYRRRVHELQDALAGCTCKGTLMVYQKSMKSTSVRSDVDSGRSKAS 1649
Query: 313 SGKRSVAQVTDDTKIFEEGQLGKA-PTGGNLSTYKELCSLASDL 441
S K + D+ + + Q A T N ++ L S +SDL
Sbjct: 1650 SIKSHDIHILDEVEEWLSEQSKNAKTTKANNASRDSLISSSSDL 1693
>SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 483 SQLYLEFKERGSV-RLPLHSVASRGPAVRAPAPDSAAPVPLPVRPH 617
+Q+Y E++ G + +LP S A+ P V P P+ + LPV PH
Sbjct: 27 AQIYNEYRAMGRLAQLPGASRAAPPPPVPEPEPEPDLDLDLPVPPH 72
>SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53)
Length = 287
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 501 FKERGSVRLPLHSVASRGPAVRAPAP--DSAAPVPLPVRPHAA 623
F + P A+ PA APAP +AAP P P P AA
Sbjct: 81 FAPSAPLAAPAQVAAAPAPAAAAPAPVPAAAAPAPAPAAPSAA 123
>SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 433 SDLNKPDLLYKFMHLAHHNSIWNSKKGAAFGFHSIASQAGAQLSEHLPRIVPRLYRYRFD 612
+++ K L L+H+NS N ++ A G S+ Q L EHL +V ++ D
Sbjct: 56 TNVRKQGLKDLLSQLSHYNS--NIRQEALLGLRSLFQQHEGILHEHLGTVVEKIAEKVTD 113
Query: 613 PTPRIQTSMTSIWHAIVP 666
++ S+ + I+P
Sbjct: 114 TEASVRHSLLLLLRHILP 131
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -1
Query: 464 LYKRSGLFKSEASEQSSLYVERFPPVGAFPSCPSSNIFVSSVTWATDRL----PLVSCSM 297
LYK S L+KS + +SS + P + P SS+++ SS + + L PL CS
Sbjct: 691 LYKSSPLYKSSSLYKSSPLHKSSPLYKSSPLYKSSSLYKSSSLYKSSALYKSSPLYKCSS 750
Query: 296 I*PTSDFF 273
+ +S +
Sbjct: 751 LCKSSSLY 758
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 464 LYKRSGLFKSEASEQSSLYVERFPPVGAFPSCPSSNIFVSS 342
LYK S L+KS + +SS + P C SS+++ SS
Sbjct: 721 LYKSSSLYKSSSLYKSSALYKSSPLYKCSSLCKSSSLYKSS 761
>SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 672
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 615 HAAHTDLHDQHMARHRAQHAGHC-SKISQGNSG 710
HA +T H+ +ARH A AGH + + Q N G
Sbjct: 464 HATNTGGHETVIARHAADIAGHAINTVGQSNKG 496
>SB_12722| Best HMM Match : Oxysterol_BP (HMM E-Value=1.2)
Length = 640
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +1
Query: 256 NSDETQKKSLVGQIIEQLTSGKRSVAQVTDDTKIFEEGQLGKAPTGGNLSTYKELCSLAS 435
N D+ +K S G+ E + + S T+DTK ++G+ GK G E C AS
Sbjct: 280 NGDKCEKDSGFGRTDESTKNDESSEQDTTEDTK-RDKGKTGKGSNGNERGDRTE-CKKAS 337
Query: 436 DLNKP 450
P
Sbjct: 338 PPESP 342
>SB_27105| Best HMM Match : GDC-P (HMM E-Value=0)
Length = 767
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 409 YKELCSLASDLNKPDLLYKFMHLAHHNSIWNSKKGAAF 522
Y+E L+ +++PDLL + ++ N IW S G +
Sbjct: 16 YREDLQLSEAISEPDLLSRLRQISKGNQIWRSYIGMGY 53
>SB_20006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = +1
Query: 628 QTSMTSIWHAIVPNTQATVQKYHKEILDDLVXNMTSNXWRVRMACCTALAELLRGAKSLH 807
Q++ IW P T A ++ Y EI D + S W +R ++ L L
Sbjct: 59 QSAWEEIWLENTPGTDAGLRLYVGEITDICCTALASQVWLIRAQAAQTVSSLAAKLGKLS 118
Query: 808 DSS 816
SS
Sbjct: 119 ASS 121
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 477 GASQLYL-EFKERGSVRLPLHSVASRGPAVRAPAPDSAAPVPLPVRPHAAHT 629
G QL L E +E+ P V S G V P P +A +P P +P T
Sbjct: 415 GREQLQLVEIQEKDPKAFPALPVRSGGTPVPQPPPPAADSIPTPPQPQPPAT 466
>SB_9209| Best HMM Match : Pyocin_S (HMM E-Value=1.8)
Length = 365
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 507 ERGSVRLPLHSVASRGPAVRAPAPDSAAPVPLP 605
E +LP + + RG + R P P+ A +P+P
Sbjct: 187 ETSPEKLPARATSDRGQSQRVPTPEGAKTMPVP 219
>SB_20198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 493 IWNSKKGAAFGFHSIASQAGAQLSEHLPRIVPRLYRY-RFDP 615
+W + G+A F I GA SEHL +V YRY RF P
Sbjct: 249 VWVLENGSAKVFQRIT---GADASEHLVNLVETPYRYVRFHP 287
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 169 LQDAFMDFLSENSDTIQDVASK----GLSLVYQNSDETQKKSLVGQIIEQLTS 315
+ D F +F+ NS T QD+ S GL + DE K+SL + QLTS
Sbjct: 825 IDDVFGEFVPGNSQTQQDLLSMMERYGLVARFNAPDENGKESLQYLVPAQLTS 877
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 556 QLSEHLPRIVPRLYRYRFDPTPRIQTSMTSIWHAIVPNTQATVQKY 693
Q +E L I P L + P + +W A+ P +ATVQ++
Sbjct: 388 QETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVRATVQEH 433
>SB_41489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 151 KNKVQELQDAFMDFLSENSDTIQDVASKGLSLVYQNSDETQKKSLVGQIIEQLTSGKRSV 330
+ K +EL D F +++ S +QD + L +N D+ +K +V I L G R
Sbjct: 11 ETKRKELSDKFQTTINDISQQMQDNFKRNEQLKQENEDQITRKFVVYAEIWGL-RGLRGE 69
Query: 331 AQVT 342
+Q+T
Sbjct: 70 SQIT 73
>SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 157
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 483 SQLYLEFKERGSV-RLPLHSVASRGPAVRAPAPDSAAPVPLPVRP 614
+QLY E++ G + +LP S A+ P V P P+ + LPV P
Sbjct: 67 AQLYNEYRAMGRLAQLPGASRAAPPPPVPEPEPEPDLDLDLPVPP 111
>SB_25112| Best HMM Match : HEAT (HMM E-Value=3.09999e-40)
Length = 1002
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = +1
Query: 451 DLLYKFMHLAHHNSIWNSKKGAAFGFHSIASQAGAQLSEHLPRIVPRLYRYRFDPTPRIQ 630
DLLYK + + + HS A E R++ LY R D + ++
Sbjct: 349 DLLYKVSGVTGKMTTEGDEDDNFGTSHSNQKIIAALGLERRNRVLAGLYMGRSDVSLIVR 408
Query: 631 TSMTSIWHAIVPNTQATVQKYHKEILDDLVXNMTSNXWRVR 753
+ +W +VPNT +++ + L+ + S + R
Sbjct: 409 QAALHVWKVVVPNTPRILREILSTLFSLLLGCLASKSYDKR 449
>SB_18876| Best HMM Match : DUF1040 (HMM E-Value=2.9)
Length = 725
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 472 HLAHHNSIWNSKKGAAFGFHSIASQAGAQLSEHLPRIVP---RLYRYRFDPTPRIQTSMT 642
HLAH+ I ++ A F + Q+ + L+ ++P R + R D T + + ++
Sbjct: 437 HLAHYEEIIGTEPRAQSIFTDLLYQSLSSLALRYSHVIPSSSRTKQMRCDVTALLLSCLS 496
Query: 643 SIWHAIVPNTQATVQKYHKE 702
+W + P+ A + K + E
Sbjct: 497 FMW-SCCPSVAALLDKQYSE 515
>SB_24356| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 211 TIQDVASKGLSLVYQNSDETQKKSLVGQIIEQLTSGKRSVAQVTDDT 351
TI+ + S +S+ ++ S +T KK++ QLT + A++ D+T
Sbjct: 34 TIKSLPSIRISVTHERSRKTDKKNIRHAFRHQLTDAVHNSAKLLDET 80
>SB_20239| Best HMM Match : RanGAP1_C (HMM E-Value=3)
Length = 346
Score = 28.7 bits (61), Expect = 6.0
Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Frame = +1
Query: 196 SENSDTIQDVASKGLSLV---YQNSDETQKKSLVGQIIEQLTSGKRSVAQVTDDTKIFEE 366
S + DT++ A++ +SL+ + S T K +S V +V +
Sbjct: 66 SVDEDTVKSTANQSVSLLDKLFAESPVTDNKPRAKSSTMLPSSDSNDVGEVVSLDEYMPH 125
Query: 367 GQLGKAPTGGNLSTYKELCSLASDLNKPDLLYKFMHLAHHNSIWNSKKGAAFGFHSIASQ 546
G+L K S+ + + L + L YK + A H K+G G + +
Sbjct: 126 GRLIKEEKCVKESSNSITAPIQNTLERRSLSYKGLAAARHGRHSRGKQGVTKGLYQRKTN 185
Query: 547 AGAQLSEHLPRIV---PRLYR 600
++ H+ +V P+++R
Sbjct: 186 KDDRVG-HITSLVDFKPKMHR 205
>SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2431
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 504 KERGSVRLPLHSVASRGPAVRAPA--PDSAAP-VPLPVRPHAAHTDLHDQHM 650
KE S LP+ + A+ PAV A A P +A P P+P ++++QH+
Sbjct: 1425 KESTSNALPIATPAAAIPAVAAAAAMPAAATPAAPVPAPSAPPQPEINEQHL 1476
>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 100 SIWLLALLKNCPERFPIKNKVQELQDAFMDFLSENSDTIQ 219
S+ LL+L E P K K++ LQD F+D +++NS IQ
Sbjct: 490 SLGLLSLNLIESEMSP-KQKLRALQDVFLDTVTKNSRVIQ 528
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.130 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,713,043
Number of Sequences: 59808
Number of extensions: 583836
Number of successful extensions: 2930
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2913
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -