Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C07
         (821 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.6  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   2.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   4.5  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   4.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   7.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   7.9  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 422 QSSLYVERFPPVGAFPSCPSSNI 354
           Q+   +E+   VGAF  CP+ N+
Sbjct: 244 QTENSLEKAKQVGAFMGCPTRNV 266


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 422 QSSLYVERFPPVGAFPSCPSSNI 354
           Q+   +E+   VGAF  CP+ N+
Sbjct: 115 QTENSLEKAKQVGAFMGCPTRNV 137


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 422 QSSLYVERFPPVGAFPSCPSSNI 354
           Q+   +E+   VGAF  CP+ N+
Sbjct: 244 QTENSLEKAKQVGAFMGCPTRNV 266


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 341 RTIRRYLKRDNSEKLLQEEIFLRTRNS 421
           R  RRY K  N ++ L EE   R RNS
Sbjct: 13  RKDRRYEKLHNEKEKLLEERTNRKRNS 39


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 341 RTIRRYLKRDNSEKLLQEEIFLRTRNS 421
           R  RRY K  N ++ L EE   R RNS
Sbjct: 13  RKDRRYEKLHNEKEKLLEERTNRKRNS 39


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 806 WRLFAPRNSSAKAVQQAIRT 747
           WR++    S+ KA+ Q  RT
Sbjct: 268 WRIYNAAVSTTKAINQGFRT 287


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 154 NKVQELQDAFMDFLSENSDTIQDVAS 231
           N+ Q L    +D ++ N DT+Q V S
Sbjct: 329 NEHQSLDRQNIDVVARNEDTLQMVVS 354


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 624 HTDLHDQHMARHRAQHAGHCSKISQ 698
           H   H+QHM   + Q +   S+ SQ
Sbjct: 194 HLQAHEQHMMYQQQQQSQAASQQSQ 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.130    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,341
Number of Sequences: 438
Number of extensions: 5015
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)