SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_C03
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           28   0.051
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   3.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.3  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   3.3  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   3.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   5.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 0.051
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 342 VPICPLPQPLSQSQITSPGPSSTS 413
           +P+ P P PL+   +  PG S+TS
Sbjct: 86  IPVAPEPAPLASPLVQEPGSSTTS 109


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 357 LPQPLSQSQITSPGPSSTS-ELTHPSQRSAN 446
           +P P  QSQI +P P  TS   T+ S  S N
Sbjct: 407 VPVPPMQSQIINPQPQITSPSNTNTSTSSTN 437


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -3

Query: 583 FFFFFLTLIKV--YFTYCETRHIN 518
           F F F+TL+ +  YF  CE   +N
Sbjct: 447 FIFTFITLLTIGLYFQLCEFSRLN 470


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 270 PLEPWTAMDASSRPSFTSA 214
           P E W  M A+  P+FTS+
Sbjct: 80  PGEKWKEMRATLSPAFTSS 98


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 339 RVPICPLPQPLSQSQITSPGPSSTS 413
           ++P    P   S S + SP P+S S
Sbjct: 213 KIPPAEFPTTSSSSALESPNPASRS 237


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 339 RVPICPLPQPLSQSQITSPGPSSTS 413
           ++P    P   S S + SP P+S S
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRS 26


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 339 RVPICPLPQPLSQSQITSPGPSSTS 413
           ++P    P   S S + SP P+S S
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRS 26


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 339 RVPICPLPQPLSQSQITSPGPSSTS 413
           ++P    P   S S + SP P+S S
Sbjct: 213 KIPPAEFPTTSSSSALESPDPASRS 237


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 154 PGQIPVPISDQQRN 195
           PG IPVP  ++ RN
Sbjct: 242 PGAIPVPDKNRPRN 255


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 192 ESVARNKERS*TRAVRMHPSPSKVQAATLPLM 287
           E+V R+K     RAV    SP+ ++   +PL+
Sbjct: 103 ETVVRDKAVESLRAVAQQHSPADLENHFVPLV 134


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 102 CALAKLMPKLCRKMLTFSRTNTSTNIRPAT 191
           C+  KL+  +     TF+ +N++TN  P T
Sbjct: 257 CSPKKLIVGIPFYGRTFTLSNSNTNYNPGT 286


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 357 LPQPLSQSQITSPGPSSTSE 416
           LP P      +SP PS +SE
Sbjct: 191 LPTPTCSEASSSPTPSHSSE 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,807
Number of Sequences: 336
Number of extensions: 3627
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -