Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_B17
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical ...   161   7e-40
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr...    58   6e-09
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr...    58   6e-09
Z71258-4|CAA95783.2|  423|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical...    29   4.1  
AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical...    29   4.1  
U58750-3|AAB00643.2|  350|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical
           protein Y62E10A.6 protein.
          Length = 458

 Score =  161 bits (390), Expect = 7e-40
 Identities = 78/158 (49%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
 Frame = +1

Query: 331 PRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTK 510
           PR+ IVG+GPAG +A   L +     +D+ E  PVPFGL+RYGVAPDH EVKNVIN F  
Sbjct: 26  PRLAIVGSGPAGMFACNGLLRKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDA 85

Query: 511 VAQ--RPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLGIENENAKNVIGARH 684
           + +  R  +  + NV +G+DIT ++L + YDAVLL YG+ K +TL I   +A NVI    
Sbjct: 86  MFEKNRERLKLFCNVNIGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSE 145

Query: 685 FVGWYNGLPSNKDLEIDLSCDTAAILGQGNVXLDVARI 798
           FVGWYNG+P+      DL+     I+G GNV LD AR+
Sbjct: 146 FVGWYNGVPNAS--TPDLTTSNVVIVGNGNVALDCARV 181


>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
 Frame = +1

Query: 334  RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 513
            R+ I+G+GP+G  AA  L K +   + + E+     GL+RYG+ P     K V+++   +
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVK-VGHTVVVYERKNRVGGLLRYGI-PTMKLDKFVVDRRVSL 1905

Query: 514  AQRPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLGIENENAKNVIGARHFVG 693
             ++  V F  N  +GK +  + L +  DA+++  G+   + L +E  +AK V  A  ++ 
Sbjct: 1906 LEQEGVRFLTNTEIGKHVPADFLLKENDAIIVCTGSTTARDLNVEGRDAKGVCFAMEYLE 1965

Query: 694  WYNGLPSNKDLE---IDLSCDTAAILGQGNVXLD 786
                  +  D+    +D +     ILG G+   D
Sbjct: 1966 KSQRRRAGDDVSWEGLDPANKKVIILGGGDTATD 1999


>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
 Frame = +1

Query: 334  RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 513
            R+ I+G+GP+G  AA  L K +   + + E+     GL+RYG+ P     K V+++   +
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVK-VGHTVVVYERKNRVGGLLRYGI-PTMKLDKFVVDRRVSL 1905

Query: 514  AQRPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLGIENENAKNVIGARHFVG 693
             ++  V F  N  +GK +  + L +  DA+++  G+   + L +E  +AK V  A  ++ 
Sbjct: 1906 LEQEGVRFLTNTEIGKHVPADFLLKENDAIIVCTGSTTARDLNVEGRDAKGVCFAMEYLE 1965

Query: 694  WYNGLPSNKDLE---IDLSCDTAAILGQGNVXLD 786
                  +  D+    +D +     ILG G+   D
Sbjct: 1966 KSQRRRAGDDVSWEGLDPANKKVIILGGGDTATD 1999


>Z71258-4|CAA95783.2|  423|Caenorhabditis elegans Hypothetical
           protein C01H6.4 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 334 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 426
           ++CI+GAG AG  +A H  K    ++D+ E+
Sbjct: 4   KICIIGAGAAGLVSAKHAIKQ-GYQVDIFEQ 33


>U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical
           protein C46H11.2 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 334 RVCIVGAGPAGFYAAMH-LTKNIQCKI 411
           RVC++GAG AG  AA H L + ++ ++
Sbjct: 4   RVCVIGAGAAGLAAAKHSLAQGLEVEV 30


>AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical
           protein Y37E3.17a protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 313 TSYTKIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 426
           +S TK    C++G+G AG   A HLTK     + L+E+
Sbjct: 22  SSSTKHVFACVLGSGVAGSSVAYHLTKRNIKDVLLLER 59


>AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical
           protein Y37E3.17b protein.
          Length = 837

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 313 TSYTKIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 426
           +S TK    C++G+G AG   A HLTK     + L+E+
Sbjct: 22  SSSTKHVFACVLGSGVAGSSVAYHLTKRNIKDVLLLER 59


>U58750-3|AAB00643.2|  350|Caenorhabditis elegans Hypothetical
           protein F55G1.6 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 459 CSSRSP*S-KKCNKSIYQSGSTTRGQFLWKCYSRKRYHF 572
           C S SP +   CN S Y       G  L  C+ RK +HF
Sbjct: 110 CCSTSPGTCTNCNDSNYLEDGDVLGYKLKPCFCRKLFHF 148


>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 304 YSATSYTKIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPV 435
           +SA      P   IVGAG AG   A  LT++   ++ LIE  PV
Sbjct: 29  FSADIAENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEAGPV 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,478,425
Number of Sequences: 27780
Number of extensions: 390885
Number of successful extensions: 794
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)