Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_B14
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0263 + 26752759-26754393 34 0.15
06_03_1222 - 28521799-28521900,28521952-28522029,28522292-285243... 33 0.27
06_01_0928 - 7159857-7159922,7159923-7160024,7160126-7160206,716... 32 0.47
06_03_1214 + 28469848-28473048 32 0.62
07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056 31 1.1
05_06_0133 + 25905455-25905545,25905650-25906202,25906310-259068... 31 1.1
02_02_0034 - 6246183-6246553,6246672-6249699 31 1.1
10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018 31 1.4
11_01_0681 - 5568312-5568328,5569057-5569213,5569321-5569482,556... 30 2.5
09_04_0524 + 18321110-18323978,18324098-18324576 30 2.5
06_03_0570 - 22363197-22363588,22363755-22366782 29 3.3
06_01_0601 + 4337575-4340149,4340566-4340978 29 3.3
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 29 3.3
10_06_0045 - 10048056-10048469 29 5.8
02_02_0032 - 6227556-6227926,6228322-6231085 29 5.8
06_03_1056 + 27239176-27242361 28 7.6
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 28 7.6
03_01_0659 + 4829496-4829596,4830033-4830083,4832527-4834237 28 7.6
>05_06_0263 + 26752759-26754393
Length = 544
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +1
Query: 172 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPAL 351
+ +A+ C L+ L L N GV A A+SK L P+L SD+ T
Sbjct: 319 LAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGT------ 372
Query: 352 SALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLL 459
A+ + + + +L VL+++ N + LA+ L
Sbjct: 373 VAIINTLKQSAPQLEVLEMAGNEINAKASQALAECL 408
Score = 31.9 bits (69), Expect = 0.62
Identities = 43/203 (21%), Positives = 72/203 (35%), Gaps = 1/203 (0%)
Frame = +1
Query: 157 KXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTE 336
K + + + NL+ L + + + AAQA+S+ + S +LKI F + TG
Sbjct: 230 KGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFHNNMTG----- 284
Query: 337 IPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXX 516
+ + M+ L S G G LA+ L C+
Sbjct: 285 -DEGAMFIAE-MVKRSPNLESFRCSATRIGSDGGVALAEAL--GTCTRLKKLDLRDNLFG 340
Query: 517 ITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALAKVFQEMGSLXEI-AMPQNGIYHV 693
+ G ++++ N LEN G A+ ++ E+ M N I
Sbjct: 341 VEAGLALSKTLSKLPDLVELYLSDLN-LENKGTVAIINTLKQSAPQLEVLEMAGNEINAK 399
Query: 694 GITALSEAFKHNPALNHLNLNDN 762
AL+E +L L L +N
Sbjct: 400 ASQALAECLTAMQSLKKLTLAEN 422
>06_03_1222 -
28521799-28521900,28521952-28522029,28522292-28524335,
28525188-28525303
Length = 779
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFS-D 309
+ L+LD + ++ A+ C NL+YL+L N +SK + L+IA FS +
Sbjct: 310 EELRLDNNNMSGELPSAVGNCTNLRYLSLRNNKF----VGDLSKVNFTRLNLRIADFSIN 365
Query: 310 MFTGRMKTEI 339
FTG + I
Sbjct: 366 NFTGTVPESI 375
>06_01_0928 -
7159857-7159922,7159923-7160024,7160126-7160206,
7160289-7160384,7160462-7160566,7160648-7160722,
7161372-7161431,7161960-7162090,7162175-7162250,
7163390-7163459,7163603-7163664,7163788-7163871,
7163973-7164047,7164448-7164585,7164733-7164791,
7164910-7165123,7167996-7168091,7168701-7169639
Length = 842
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +1
Query: 574 VFIAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNL 753
V +AGR + ++G LA+ S E+ NGI VGI A + N AL LNL
Sbjct: 413 VNMAGR-QFGDEGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNL 471
Query: 754 NDN 762
+ N
Sbjct: 472 SGN 474
>06_03_1214 + 28469848-28473048
Length = 1066
Score = 31.9 bits (69), Expect = 0.62
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFS-D 309
+ L+LD + ++ A+ C NL+YL+L N +SK + L+IA FS +
Sbjct: 313 EELRLDNNNMSGELPSALGNCTNLRYLSLRNNKF----VGDLSKVNFTWLNLRIADFSIN 368
Query: 310 MFTGRMKTEI 339
FTG + I
Sbjct: 369 NFTGTVPESI 378
>07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056
Length = 1109
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/98 (30%), Positives = 40/98 (40%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDM 312
+SL L A + D+I C NL YL+L GN + I + L L + +
Sbjct: 240 RSLDLSANHFAGEFPDSIASCSNLTYLSLWGNGFAGKISAGIGE-LAGLETLILGK---- 294
Query: 313 FTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFG 426
R IPP L+ L LD+S NAFG
Sbjct: 295 --NRFDRRIPPELTNC--------TSLQFLDMSTNAFG 322
>05_06_0133 +
25905455-25905545,25905650-25906202,25906310-25906806,
25906905-25907043,25907182-25907253,25907344-25907415,
25907503-25907583,25907899-25908065,25908148-25908416,
25908512-25908638,25908752-25908820,25908928-25909120,
25909215-25909707
Length = 940
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALE 273
++L L K I DA+++ P+L +L LTGN L + + K ++
Sbjct: 449 QNLDLSNNKLTGPIPDALSQLPSLTFLDLTGNQLSGSIPSGLLKRIQ 495
>02_02_0034 - 6246183-6246553,6246672-6249699
Length = 1132
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 67 LNSLNTVLDAPAQPETGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTA 246
L+ + + P PE G + S+ + + I + KC L+YL + GN L +
Sbjct: 616 LDLSHNLFTGPILPEIGNLINLGSISIANNRLTGDIPSTLGKCVLLEYLHMEGNLLTGSI 675
Query: 247 AQAISKALESHPELKIAR 300
Q+ L+S EL ++R
Sbjct: 676 PQSFMN-LKSIKELDLSR 692
>10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018
Length = 1040
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 139 LKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISK 264
L + K A + DAI+ C +L L + GN+L T +ISK
Sbjct: 525 LYMHNNKLAGALPDAISSCQSLMELRMDGNSLNSTIPVSISK 566
>11_01_0681 -
5568312-5568328,5569057-5569213,5569321-5569482,
5569524-5570546
Length = 452
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDM 312
+ L L K +D + CP LQ+L + G L + A+ IS H + FSD
Sbjct: 213 QKLDLYGVKLMHNFLD-FSSCPVLQHLEIAGCDLSDSNARKISSLSIKHLNISGCNFSDT 271
Query: 313 F 315
F
Sbjct: 272 F 272
>09_04_0524 + 18321110-18323978,18324098-18324576
Length = 1115
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Frame = +1
Query: 172 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALE----SHPELKIARFSDMFTGRMKTEI 339
+ AI+ C +L++L L N L + + + ++L+ S +L A S + T++
Sbjct: 509 VPSAISGCSSLEFLDLHSNALSGSLPETLPRSLQLIDVSDNQLAGALSSSIGLMPELTKL 568
Query: 340 PPALSALGDGM---IAAGARLXVLDLSDNAFGPI 432
+ L G+ I + +L +LDL DNAF +
Sbjct: 569 YLGKNRLAGGIPPEIGSCQKLQLLDLGDNAFSGV 602
>06_03_0570 - 22363197-22363588,22363755-22366782
Length = 1139
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 88 LDAPAQPETGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKA 267
L P E G + L + K + +I A+ C L+YL + GN L ++ S A
Sbjct: 625 LSGPIPVEVGSLINLGPLNISNNKLSGEIPSALGDCVRLEYLNMEGNVLNGQIPKSFS-A 683
Query: 268 LESHPELKIAR 300
L ++ ++R
Sbjct: 684 LRGIIQMDLSR 694
>06_01_0601 + 4337575-4340149,4340566-4340978
Length = 995
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/97 (26%), Positives = 43/97 (44%)
Frame = +1
Query: 67 LNSLNTVLDAPAQPETGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTA 246
LN N +LD + G ++L L + I I C L+Y+ L+GN+L +
Sbjct: 445 LNLSNNLLDGHVPLQIGNMEMTEALDLSMNNLSGAIPATIAGCVALEYINLSGNSLQGSL 504
Query: 247 AQAISKALESHPELKIARFSDMFTGRMKTEIPPALSA 357
+I K P L + D+ + + +PP+L A
Sbjct: 505 PTSIGKL----PNLHVL---DVSSNGLTGVLPPSLQA 534
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 29.5 bits (63), Expect = 3.3
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +1
Query: 139 LKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFT 318
LKLD A+ + + L+ L L+G+ + A+SK P LK +++
Sbjct: 454 LKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKL----PHLK-----ELYL 504
Query: 319 GRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFG--PIGVEGLAKLLQSDV 471
RMK L D ++ L +LDLS N P G++ L L++ D+
Sbjct: 505 RRMK------LHGFPDSLLGL-KLLRILDLSQNYLTSVPEGIKDLTSLIELDL 550
>10_06_0045 - 10048056-10048469
Length = 137
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 156 EXCTTNCRRDQ*MPEPPISCVDRQYTGCDGRPG 254
+ CT NC +Q +P PPI+ + G G G
Sbjct: 22 QGCTPNCSGEQVVPTPPIAVPTPSHHGGHGEHG 54
>02_02_0032 - 6227556-6227926,6228322-6231085
Length = 1044
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 67 LNSLNTVLDAPAQPETGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTA 246
L+ + + P E G + S+ + + +I + KC L+YL + GN L +
Sbjct: 616 LDLSHNLFTGPIPLEIGNLINLGSISISNNRLNGEIPSTLGKCVLLEYLHMEGNLLTGSI 675
Query: 247 AQAISKALESHPELKIARFS 306
Q+ L+S EL ++R S
Sbjct: 676 PQSFMN-LKSIKELDLSRNS 694
>06_03_1056 + 27239176-27242361
Length = 1061
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 178 DAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEI 339
DA + PNLQYL L GN L + ++S A + ++ ++ F G++ EI
Sbjct: 255 DAGARTPNLQYLFLGGNLLAGPISASLSNATAL---VALSLANNSFAGQVPGEI 305
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 539 ANNLPPVMPRPLLFXXXXXXSEQTSLCSSLARPSTPIGPNALS-LRSSTXKRAPAA 375
A++L P P LLF +S CSS A PS+ GP S +R T PA+
Sbjct: 12 ASHLAPFSPPLLLFFA-----SASSSCSSAASPSSASGPRGCSAVRMETGAVEPAS 62
>03_01_0659 + 4829496-4829596,4830033-4830083,4832527-4834237
Length = 620
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 268 RPWRSPGRPSHPVYCRSTQDIGGSGIY 188
RP+R P P Y RS+ +G +G Y
Sbjct: 93 RPYRYPDNSQIPYYSRSSMHVGQNGTY 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,623,357
Number of Sequences: 37544
Number of extensions: 465959
Number of successful extensions: 1332
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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