Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_B14
(807 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein. 215 1e-55
CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein. 215 1e-55
BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein. 215 1e-55
BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating p... 215 1e-55
AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating p... 215 1e-55
AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein. 215 1e-55
AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein. 43 0.002
AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein. 43 0.002
AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein. 42 0.002
AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin doma... 42 0.002
AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform prot... 42 0.002
AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing APAF1-... 42 0.002
AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein. 42 0.002
Z95113-1|CAI17901.1| 836|Homo sapiens protein ( Human DNA seque... 39 0.024
CR456397-1|CAG30283.1| 836|Homo sapiens bK175E3.6 protein. 39 0.024
BC094857-1|AAH94857.1| 643|Homo sapiens ZNRF3 protein protein. 39 0.024
BC069019-1|AAH69019.1| 643|Homo sapiens ZNRF3 protein protein. 39 0.024
BC021570-1|AAH21570.1| 653|Homo sapiens ZNRF3 protein protein. 39 0.024
BC009252-1|AAH09252.2| 644|Homo sapiens ZNRF3 protein protein. 39 0.024
AL021393-4|CAI17992.1| 836|Homo sapiens protein ( Human DNA seq... 39 0.024
AB051436-1|BAB33319.1| 891|Homo sapiens KIAA1133 protein protein. 39 0.024
BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein. 38 0.056
AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4 is... 38 0.056
AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin doma... 38 0.056
BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein. 37 0.075
AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein. 37 0.075
AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein. 37 0.075
AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein. 37 0.075
AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein. 37 0.075
AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein ... 36 0.13
AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein. 36 0.13
X86018-1|CAA60013.1| 617|Homo sapiens muf1 protein. 33 0.92
BX537366-1|CAD97609.1| 617|Homo sapiens hypothetical protein pr... 33 0.92
BC101524-1|AAI01525.1| 812|Homo sapiens leucine rich repeat con... 33 0.92
BC101522-1|AAI01523.1| 812|Homo sapiens leucine rich repeat con... 33 0.92
BC092479-1|AAH92479.1| 668|Homo sapiens LRRC41 protein protein. 33 0.92
BC004953-1|AAH04953.2| 572|Homo sapiens LRRC41 protein protein. 33 0.92
AL122001-5|CAI21964.1| 812|Homo sapiens leucine rich repeat con... 33 0.92
AL121602-2|CAI22118.1| 812|Homo sapiens leucine rich repeat con... 33 0.92
AK223420-1|BAD97140.1| 614|Homo sapiens MUF1 protein variant pr... 33 0.92
AK125827-1|BAC86308.1| 620|Homo sapiens protein ( Homo sapiens ... 33 0.92
BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open read... 33 1.2
BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open read... 33 1.2
AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein. 33 1.2
AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4 is... 33 1.2
AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat con... 32 2.8
AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat con... 32 2.8
AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat con... 32 2.8
EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein. 31 3.7
BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein. 31 3.7
BC071866-1|AAH71866.1| 460|Homo sapiens LRFN4 protein protein. 31 3.7
BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat con... 31 3.7
BC015581-1|AAH15581.2| 635|Homo sapiens leucine rich repeat and... 31 3.7
BC007718-1|AAH07718.1| 541|Homo sapiens LRFN4 protein protein. 31 3.7
AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein. 31 3.7
AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens ... 31 3.7
AB209005-1|BAD92242.1| 622|Homo sapiens leucine rich repeat and... 31 3.7
AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein. 31 3.7
AC005757-1|AAC62258.1| 540|Homo sapiens R32611_1 protein. 31 4.9
>X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein.
Length = 587
Score = 215 bits (526), Expect = 1e-55
Identities = 115/225 (51%), Positives = 144/225 (64%), Gaps = 9/225 (4%)
Frame = +1
Query: 118 VDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+ F GKSLKL+TA+ A+ ++ I +L+ L L GNT+GV AA+ I+KALE ELK
Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
Query: 298 RFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCS 477
+SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLSDNAFGP GV+G LL+S C
Sbjct: 83 HWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACF 142
Query: 478 DXXXXXXXXXXXXITGGXXXXXXXXXXXXXXX---------VFIAGRNRLENDGATALAK 630
I GG VF+AGRNRLENDGATALA+
Sbjct: 143 TLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAE 202
Query: 631 VFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDNT 765
F+ +G+L E+ MPQNGI H GITAL++AF NP L +NLNDNT
Sbjct: 203 AFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNT 247
>CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein.
Length = 587
Score = 215 bits (526), Expect = 1e-55
Identities = 115/225 (51%), Positives = 144/225 (64%), Gaps = 9/225 (4%)
Frame = +1
Query: 118 VDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+ F GKSLKL+TA+ A+ ++ I +L+ L L GNT+GV AA+ I+KALE ELK
Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
Query: 298 RFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCS 477
+SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLSDNAFGP GV+G LL+S C
Sbjct: 83 HWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACF 142
Query: 478 DXXXXXXXXXXXXITGGXXXXXXXXXXXXXXX---------VFIAGRNRLENDGATALAK 630
I GG VF+AGRNRLENDGATALA+
Sbjct: 143 TLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAE 202
Query: 631 VFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDNT 765
F+ +G+L E+ MPQNGI H GITAL++AF NP L +NLNDNT
Sbjct: 203 AFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNT 247
>BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein.
Length = 587
Score = 215 bits (526), Expect = 1e-55
Identities = 115/225 (51%), Positives = 144/225 (64%), Gaps = 9/225 (4%)
Frame = +1
Query: 118 VDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+ F GKSLKL+TA+ A+ ++ I +L+ L L GNT+GV AA+ I+KALE ELK
Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
Query: 298 RFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCS 477
+SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLSDNAFGP GV+G LL+S C
Sbjct: 83 HWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACF 142
Query: 478 DXXXXXXXXXXXXITGGXXXXXXXXXXXXXXX---------VFIAGRNRLENDGATALAK 630
I GG VF+AGRNRLENDGATALA+
Sbjct: 143 TLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAE 202
Query: 631 VFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDNT 765
F+ +G+L E+ MPQNGI H GITAL++AF NP L +NLNDNT
Sbjct: 203 AFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNT 247
>BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 215 bits (526), Expect = 1e-55
Identities = 115/225 (51%), Positives = 144/225 (64%), Gaps = 9/225 (4%)
Frame = +1
Query: 118 VDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+ F GKSLKL+TA+ A+ ++ I +L+ L L GNT+GV AA+ I+KALE ELK
Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
Query: 298 RFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCS 477
+SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLSDNAFGP GV+G LL+S C
Sbjct: 83 HWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACF 142
Query: 478 DXXXXXXXXXXXXITGGXXXXXXXXXXXXXXX---------VFIAGRNRLENDGATALAK 630
I GG VF+AGRNRLENDGATALA+
Sbjct: 143 TLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAE 202
Query: 631 VFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDNT 765
F+ +G+L E+ MPQNGI H GITAL++AF NP L +NLNDNT
Sbjct: 203 AFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNT 247
>AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 215 bits (526), Expect = 1e-55
Identities = 115/225 (51%), Positives = 144/225 (64%), Gaps = 9/225 (4%)
Frame = +1
Query: 118 VDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+ F GKSLKL+TA+ A+ ++ I +L+ L L GNT+GV AA+ I+KALE ELK
Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
Query: 298 RFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCS 477
+SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLSDNAFGP GV+G LL+S C
Sbjct: 83 HWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACF 142
Query: 478 DXXXXXXXXXXXXITGGXXXXXXXXXXXXXXX---------VFIAGRNRLENDGATALAK 630
I GG VF+AGRNRLENDGATALA+
Sbjct: 143 TLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAE 202
Query: 631 VFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDNT 765
F+ +G+L E+ MPQNGI H GITAL++AF NP L +NLNDNT
Sbjct: 203 AFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNT 247
>AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein.
Length = 623
Score = 215 bits (526), Expect = 1e-55
Identities = 115/225 (51%), Positives = 144/225 (64%), Gaps = 9/225 (4%)
Frame = +1
Query: 118 VDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+ F GKSLKL+TA+ A+ ++ I +L+ L L GNT+GV AA+ I+KALE ELK
Sbjct: 59 LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 118
Query: 298 RFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCS 477
+SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLSDNAFGP GV+G LL+S C
Sbjct: 119 HWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACF 178
Query: 478 DXXXXXXXXXXXXITGGXXXXXXXXXXXXXXX---------VFIAGRNRLENDGATALAK 630
I GG VF+AGRNRLENDGATALA+
Sbjct: 179 TLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAE 238
Query: 631 VFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDNT 765
F+ +G+L E+ MPQNGI H GITAL++AF NP L +NLNDNT
Sbjct: 239 AFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNT 283
>AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein.
Length = 1065
Score = 42.7 bits (96), Expect = 0.002
Identities = 50/200 (25%), Positives = 74/200 (37%)
Frame = +1
Query: 163 AQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIP 342
AQ I A+ L+ L LT N L A+AI+ A+ + L F
Sbjct: 851 AQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQA------ 904
Query: 343 PALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXIT 522
A ALG + L LDL +NA G G +A+ L+ V + +
Sbjct: 905 GAAQALGQAL-QLNRSLTSLDLQENAIGDDGACAVARALK--VNTALTALYLQVASIGAS 961
Query: 523 GGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGIT 702
G + + G N + GA ALA + SL + + +N + G
Sbjct: 962 GAQVLGEALAVNRTLEILDLRG-NAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1020
Query: 703 ALSEAFKHNPALNHLNLNDN 762
++ A N L H+NL N
Sbjct: 1021 CIATALSGNHRLQHINLQGN 1040
Score = 40.7 bits (91), Expect = 0.006
Identities = 32/125 (25%), Positives = 46/125 (36%)
Frame = +1
Query: 391 LXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXX 570
L LDL N+ GP G + LA L+ + G
Sbjct: 696 LTSLDLRGNSIGPQGAKALADALK---INRTLTSLSLQGNTVRDDGARSMAEALASNRTL 752
Query: 571 XVFIAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLN 750
+ +N + GA +A ++ SL E+ N I G AL+EA K N L L+
Sbjct: 753 SMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLD 812
Query: 751 LNDNT 765
L N+
Sbjct: 813 LQSNS 817
Score = 39.9 bits (89), Expect = 0.011
Identities = 47/217 (21%), Positives = 79/217 (36%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 291
T +D G S+ AK + DA+ L L+L GNT+ A+++++AL S+ L
Sbjct: 697 TSLDLRGNSIGPQGAKA---LADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753
Query: 292 IARFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDV 471
+ G P + D + L L S N+ G G + LA+ L+
Sbjct: 754 MLHLQKNSIG------PMGAQRMADA-LKQNRSLKELMFSSNSIGDGGAKALAEALK--- 803
Query: 472 CSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALAKVFQEMGS 651
+ G N + +GA A+A +
Sbjct: 804 VNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANST 863
Query: 652 LXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDN 762
L + + N ++ G A++ A + N L L+L N
Sbjct: 864 LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWN 900
Score = 31.5 bits (68), Expect = 3.7
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +1
Query: 154 AKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKT 333
A AQ + +A+ L+ L L GN +GV A+A++ AL+ + L+ + G M
Sbjct: 960 ASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLG-MDG 1018
Query: 334 EIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSD 468
I A + G+ RL ++L N G G +++ ++++
Sbjct: 1019 AICIATALSGN------HRLQHINLQGNHIGDSGARMISEAIKTN 1057
>AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein.
Length = 499
Score = 42.7 bits (96), Expect = 0.002
Identities = 50/200 (25%), Positives = 74/200 (37%)
Frame = +1
Query: 163 AQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIP 342
AQ I A+ L+ L LT N L A+AI+ A+ + L F
Sbjct: 285 AQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQA------ 338
Query: 343 PALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXIT 522
A ALG + L LDL +NA G G +A+ L+ V + +
Sbjct: 339 GAAQALGQAL-QLNRSLTSLDLQENAIGDDGACAVARALK--VNTALTALYLQVASIGAS 395
Query: 523 GGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGIT 702
G + + G N + GA ALA + SL + + +N + G
Sbjct: 396 GAQVLGEALAVNRTLEILDLRG-NAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 454
Query: 703 ALSEAFKHNPALNHLNLNDN 762
++ A N L H+NL N
Sbjct: 455 CIATALSGNHRLQHINLQGN 474
Score = 40.7 bits (91), Expect = 0.006
Identities = 32/125 (25%), Positives = 46/125 (36%)
Frame = +1
Query: 391 LXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXX 570
L LDL N+ GP G + LA L+ + G
Sbjct: 130 LTSLDLRGNSIGPQGAKALADALK---INRTLTSLSLQGNTVRDDGARSMAEALASNRTL 186
Query: 571 XVFIAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLN 750
+ +N + GA +A ++ SL E+ N I G AL+EA K N L L+
Sbjct: 187 SMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLD 246
Query: 751 LNDNT 765
L N+
Sbjct: 247 LQSNS 251
Score = 39.9 bits (89), Expect = 0.011
Identities = 47/217 (21%), Positives = 79/217 (36%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 291
T +D G S+ AK + DA+ L L+L GNT+ A+++++AL S+ L
Sbjct: 131 TSLDLRGNSIGPQGAKA---LADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 187
Query: 292 IARFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDV 471
+ G P + D + L L S N+ G G + LA+ L+
Sbjct: 188 MLHLQKNSIG------PMGAQRMADA-LKQNRSLKELMFSSNSIGDGGAKALAEALK--- 237
Query: 472 CSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALAKVFQEMGS 651
+ G N + +GA A+A +
Sbjct: 238 VNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANST 297
Query: 652 LXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDN 762
L + + N ++ G A++ A + N L L+L N
Sbjct: 298 LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWN 334
Score = 31.5 bits (68), Expect = 3.7
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +1
Query: 154 AKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKT 333
A AQ + +A+ L+ L L GN +GV A+A++ AL+ + L+ + G M
Sbjct: 394 ASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLG-MDG 452
Query: 334 EIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSD 468
I A + G+ RL ++L N G G +++ ++++
Sbjct: 453 AICIATALSGN------HRLQHINLQGNHIGDSGARMISEAIKTN 491
>AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 42.3 bits (95), Expect = 0.002
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 1/206 (0%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
T+ + + ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 724 TSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCG 779
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXX 510
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 780 LSHECCFDI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSC 835
Query: 511 XXITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIY 687
+ G N L + G L K +L ++ + +G+
Sbjct: 836 CLTSACCQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLT 895
Query: 688 HVGITALSEAFKHNPALNHLNLNDNT 765
V +ALS N L HL L NT
Sbjct: 896 SVCCSALSSVLSTNQNLTHLYLRGNT 921
>AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 1036
Score = 42.3 bits (95), Expect = 0.002
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 1/206 (0%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
T+ + + ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 726 TSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCG 781
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXX 510
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 782 LSHECCFDI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSC 837
Query: 511 XXITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIY 687
+ G N L + G L K +L ++ + +G+
Sbjct: 838 CLTSACCQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLT 897
Query: 688 HVGITALSEAFKHNPALNHLNLNDNT 765
V +ALS N L HL L NT
Sbjct: 898 SVCCSALSSVLSTNQNLTHLYLRGNT 923
>AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform protein.
Length = 1036
Score = 42.3 bits (95), Expect = 0.002
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 1/206 (0%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
T+ + + ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 726 TSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCG 781
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXX 510
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 782 LSHECCFDI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSC 837
Query: 511 XXITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIY 687
+ G N L + G L K +L ++ + +G+
Sbjct: 838 CLTSACCQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLT 897
Query: 688 HVGITALSEAFKHNPALNHLNLNDNT 765
V +ALS N L HL L NT
Sbjct: 898 SVCCSALSSVLSTNQNLTHLYLRGNT 923
>AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing APAF1-like
protein 1 protein.
Length = 1034
Score = 42.3 bits (95), Expect = 0.002
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 1/206 (0%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
T+ + + ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 724 TSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCG 779
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXX 510
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 780 LSHECCFDI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSC 835
Query: 511 XXITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIY 687
+ G N L + G L K +L ++ + +G+
Sbjct: 836 CLTSACCQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLT 895
Query: 688 HVGITALSEAFKHNPALNHLNLNDNT 765
V +ALS N L HL L NT
Sbjct: 896 SVCCSALSSVLSTNQNLTHLYLRGNT 921
>AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 42.3 bits (95), Expect = 0.002
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 1/206 (0%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
T+ + + ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 724 TSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCG 779
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXX 510
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 780 LSHECCFDI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSC 835
Query: 511 XXITGGXXXXXXXXXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIY 687
+ G N L + G L K +L ++ + +G+
Sbjct: 836 CLTSACCQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLT 895
Query: 688 HVGITALSEAFKHNPALNHLNLNDNT 765
V +ALS N L HL L NT
Sbjct: 896 SVCCSALSSVLSTNQNLTHLYLRGNT 921
>Z95113-1|CAI17901.1| 836|Homo sapiens protein ( Human DNA sequence
from clone CTA-175E3 on chromosome 22q12.1. ).
Length = 836
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 548 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 606
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 607 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 634
>CR456397-1|CAG30283.1| 836|Homo sapiens bK175E3.6 protein.
Length = 836
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 548 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 606
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 607 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 634
>BC094857-1|AAH94857.1| 643|Homo sapiens ZNRF3 protein protein.
Length = 643
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 355 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 413
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 414 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 441
>BC069019-1|AAH69019.1| 643|Homo sapiens ZNRF3 protein protein.
Length = 643
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 355 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 413
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 414 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 441
>BC021570-1|AAH21570.1| 653|Homo sapiens ZNRF3 protein protein.
Length = 653
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 365 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 423
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 424 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 451
>BC009252-1|AAH09252.2| 644|Homo sapiens ZNRF3 protein protein.
Length = 644
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 356 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 414
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 415 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 442
>AL021393-4|CAI17992.1| 836|Homo sapiens protein ( Human DNA
sequence from clone CTA-747E2 on chromosome 22q12.1. ).
Length = 836
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 548 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 606
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 607 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 634
>AB051436-1|BAB33319.1| 891|Homo sapiens KIAA1133 protein protein.
Length = 891
Score = 38.7 bits (86), Expect = 0.024
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = -2
Query: 368 PSPKALKAGGISVFILPVNMSENLAILSSGCDSKALEIAWAAVTPSVLPVNARYWRFGHL 189
P P + +S L +N S N ++ G +S E+ A +P P R W+ GH
Sbjct: 603 PGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEA-SPGAAPDLRRTWKGGHE 661
Query: 188 LIASTICCAXFAVSNFRDFPEKSTPVSGCAGASSTVF 78
L + CC P + P +G AG SST+F
Sbjct: 662 LPSCACCC--------EPQPSPAGPSAGAAG-SSTLF 689
>BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein.
Length = 979
Score = 37.5 bits (83), Expect = 0.056
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +1
Query: 370 MIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXX 549
++++ +L LDLSDNA G G+ L L+ +C+ +
Sbjct: 736 VLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSCCLTSACCQDLASV 793
Query: 550 XXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIYHVGITALSEAFKH 726
G N L + G L K +L ++ + +G+ V +ALS
Sbjct: 794 LSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCSALSSVLST 853
Query: 727 NPALNHLNLNDNT 765
N L HL L NT
Sbjct: 854 NQNLTHLYLRGNT 866
>AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4 isoform
protein.
Length = 977
Score = 37.5 bits (83), Expect = 0.056
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +1
Query: 370 MIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXX 549
++++ +L LDLSDNA G G+ L L+ +C+ +
Sbjct: 734 VLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSCCLTSACCQDLASV 791
Query: 550 XXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIYHVGITALSEAFKH 726
G N L + G L K +L ++ + +G+ V +ALS
Sbjct: 792 LSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCSALSSVLST 851
Query: 727 NPALNHLNLNDNT 765
N L HL L NT
Sbjct: 852 NQNLTHLYLRGNT 864
>AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 977
Score = 37.5 bits (83), Expect = 0.056
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +1
Query: 370 MIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXX 549
++++ +L LDLSDNA G G+ L L+ +C+ +
Sbjct: 734 VLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN--LKKLWLVSCCLTSACCQDLASV 791
Query: 550 XXXXXXXXVFIAGRNRLENDGATALA-KVFQEMGSLXEIAMPQNGIYHVGITALSEAFKH 726
G N L + G L K +L ++ + +G+ V +ALS
Sbjct: 792 LSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCSALSSVLST 851
Query: 727 NPALNHLNLNDNT 765
N L HL L NT
Sbjct: 852 NQNLTHLYLRGNT 864
>BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 37.1 bits (82), Expect = 0.075
Identities = 30/121 (24%), Positives = 48/121 (39%)
Frame = +1
Query: 400 LDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXXXVF 579
L L +N +G + K+L D C GG V
Sbjct: 761 LGLYNNQITDVGARYVTKIL--DECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVG 818
Query: 580 IAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLND 759
+ G N++ ++GA A A+ + SL +++ NGI G +L+ A + N +L L L
Sbjct: 819 MWG-NQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQ 877
Query: 760 N 762
N
Sbjct: 878 N 878
>AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 37.1 bits (82), Expect = 0.075
Identities = 30/121 (24%), Positives = 48/121 (39%)
Frame = +1
Query: 400 LDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXXXVF 579
L L +N +G + K+L D C GG V
Sbjct: 761 LGLYNNQITDVGARYVTKIL--DECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVG 818
Query: 580 IAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLND 759
+ G N++ ++GA A A+ + SL +++ NGI G +L+ A + N +L L L
Sbjct: 819 MWG-NQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQ 877
Query: 760 N 762
N
Sbjct: 878 N 878
>AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein.
Length = 953
Score = 37.1 bits (82), Expect = 0.075
Identities = 30/121 (24%), Positives = 48/121 (39%)
Frame = +1
Query: 400 LDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXXXVF 579
L L +N +G + K+L D C GG V
Sbjct: 761 LGLYNNQITDVGARYVTKIL--DECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVG 818
Query: 580 IAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLND 759
+ G N++ ++GA A A+ + SL +++ NGI G +L+ A + N +L L L
Sbjct: 819 MWG-NQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQ 877
Query: 760 N 762
N
Sbjct: 878 N 878
>AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein.
Length = 953
Score = 37.1 bits (82), Expect = 0.075
Identities = 30/121 (24%), Positives = 48/121 (39%)
Frame = +1
Query: 400 LDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXXXVF 579
L L +N +G + K+L D C GG V
Sbjct: 761 LGLYNNQITDVGARYVTKIL--DECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVG 818
Query: 580 IAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLND 759
+ G N++ ++GA A A+ + SL +++ NGI G +L+ A + N +L L L
Sbjct: 819 MWG-NQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQ 877
Query: 760 N 762
N
Sbjct: 878 N 878
>AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 37.1 bits (82), Expect = 0.075
Identities = 30/121 (24%), Positives = 48/121 (39%)
Frame = +1
Query: 400 LDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXXXVF 579
L L +N +G + K+L D C GG V
Sbjct: 761 LGLYNNQITDVGARYVTKIL--DECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVG 818
Query: 580 IAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLND 759
+ G N++ ++GA A A+ + SL +++ NGI G +L+ A + N +L L L
Sbjct: 819 MWG-NQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQ 877
Query: 760 N 762
N
Sbjct: 878 N 878
>AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein
protein.
Length = 1013
Score = 36.3 bits (80), Expect = 0.13
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
TA AQ + + + +LQ+L GN +G AQA+++AL H L R+ + +
Sbjct: 857 TAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSL---RWLSLVGNNIG 913
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSD 468
+ AL+ M+A L L L +N GV LA+ L+ +
Sbjct: 914 SVGAQALAL----MLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 955
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 592 NRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDN 762
NR+ ++GA ALA+ + SL +++ N I VG AL+ N L L L +N
Sbjct: 882 NRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEEN 938
>AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein.
Length = 1040
Score = 36.3 bits (80), Expect = 0.13
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
TA AQ + + + +LQ+L GN +G AQA+++AL H L R+ + +
Sbjct: 884 TAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSL---RWLSLVGNNIG 940
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSD 468
+ AL+ M+A L L L +N GV LA+ L+ +
Sbjct: 941 SVGAQALAL----MLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 592 NRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLNDN 762
NR+ ++GA ALA+ + SL +++ N I VG AL+ N L L L +N
Sbjct: 909 NRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEEN 965
>X86018-1|CAA60013.1| 617|Homo sapiens muf1 protein.
Length = 617
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 110 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 141
>BX537366-1|CAD97609.1| 617|Homo sapiens hypothetical protein
protein.
Length = 617
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 110 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 141
>BC101524-1|AAI01525.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>BC101522-1|AAI01523.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>BC092479-1|AAH92479.1| 668|Homo sapiens LRRC41 protein protein.
Length = 668
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 309 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 340
>BC004953-1|AAH04953.2| 572|Homo sapiens LRRC41 protein protein.
Length = 572
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 118 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 149
>AL122001-5|CAI21964.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>AL121602-2|CAI22118.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>AK223420-1|BAD97140.1| 614|Homo sapiens MUF1 protein variant
protein.
Length = 614
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 160 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 191
>AK125827-1|BAC86308.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ43839 fis, clone TESTI4006079, highly similar
to Homo sapiens MUF1 protein (MUF1). ).
Length = 620
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 443 PSTPIGPNALSLRSSTXKRAPAAIMPSPKALK 348
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 248 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 279
>BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 291
T +D S + A +++ +N+C L YL + GN +G A ISK LES+ L+
Sbjct: 251 TKLDLSMNGFGNEVALALGEVL-RLNRC--LVYLDIGGNDIGNEGASKISKGLESNESLR 307
Query: 292 IAR 300
+ +
Sbjct: 308 VLK 310
>BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 291
T +D S + A +++ +N+C L YL + GN +G A ISK LES+ L+
Sbjct: 251 TKLDLSMNGFGNEVALALGEVL-RLNRC--LVYLDIGGNDIGNEGASKISKGLESNESLR 307
Query: 292 IAR 300
+ +
Sbjct: 308 VLK 310
>AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein.
Length = 608
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 291
T +D S + A +++ +N+C L YL + GN +G A ISK LES+ L+
Sbjct: 219 TKLDLSMNGFGNEVALALGEVL-RLNRC--LVYLDIGGNDIGNEGASKISKGLESNESLR 275
Query: 292 IAR 300
+ +
Sbjct: 276 VLK 278
>AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4 isoform
variant protein.
Length = 983
Score = 33.1 bits (72), Expect = 1.2
Identities = 27/109 (24%), Positives = 50/109 (45%)
Frame = +1
Query: 151 TAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 330
T+ + + ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 730 TSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCG 785
Query: 331 TEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCS 477
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 786 LSHECCFDI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN 832
>AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 31.9 bits (69), Expect = 2.8
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALES----- 276
T +D S L+ D + ++ ++K ++Q+LAL G ++ ++ L++
Sbjct: 485 TSLDISDNGLESDLST----LIVWLSKNRSIQHLAL-GKNFNNMKSKNLTPVLDNLVQMI 539
Query: 277 HPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKL 456
E + + ++KTE+ ++ALG + L +D+S N G +G + LAK
Sbjct: 540 QDEESPLQSLSLADSKLKTEVTIIINALG-----SNTSLTKVDISGNGMGDMGAKMLAKA 594
Query: 457 LQ 462
LQ
Sbjct: 595 LQ 596
>AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 31.9 bits (69), Expect = 2.8
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALES----- 276
T +D S L+ D + ++ ++K ++Q+LAL G ++ ++ L++
Sbjct: 485 TSLDISDNGLESDLST----LIVWLSKNRSIQHLAL-GKNFNNMKSKNLTPVLDNLVQMI 539
Query: 277 HPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKL 456
E + + ++KTE+ ++ALG + L +D+S N G +G + LAK
Sbjct: 540 QDEESPLQSLSLADSKLKTEVTIIINALG-----SNTSLTKVDISGNGMGDMGAKMLAKA 594
Query: 457 LQ 462
LQ
Sbjct: 595 LQ 596
>AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 31.9 bits (69), Expect = 2.8
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Frame = +1
Query: 112 TGVDFSGKSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALES----- 276
T +D S L+ D + ++ ++K ++Q+LAL G ++ ++ L++
Sbjct: 485 TSLDISDNGLESDLST----LIVWLSKNRSIQHLAL-GKNFNNMKSKNLTPVLDNLVQMI 539
Query: 277 HPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLXVLDLSDNAFGPIGVEGLAKL 456
E + + ++KTE+ ++ALG + L +D+S N G +G + LAK
Sbjct: 540 QDEESPLQSLSLADSKLKTEVTIIINALG-----SNTSLTKVDISGNGMGDMGAKMLAKA 594
Query: 457 LQ 462
LQ
Sbjct: 595 LQ 596
>EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein.
Length = 975
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 202 LQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAA 381
LQ L + N G TAA A+++A HP L++ ++ + +E L LG G
Sbjct: 837 LQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQVLRDLG-GAAEG 892
Query: 382 GARLXV 399
GAR+ V
Sbjct: 893 GARVVV 898
>BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein.
Length = 975
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 202 LQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAA 381
LQ L + N G TAA A+++A HP L++ ++ + +E L LG G
Sbjct: 837 LQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQVLRDLG-GAAEG 892
Query: 382 GARLXV 399
GAR+ V
Sbjct: 893 GARVVV 898
>BC071866-1|AAH71866.1| 460|Homo sapiens LRFN4 protein protein.
Length = 460
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+SL LD + + ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 99 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 153
>BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat
containing 34 protein.
Length = 419
Score = 31.5 bits (68), Expect = 3.7
Identities = 46/194 (23%), Positives = 69/194 (35%), Gaps = 1/194 (0%)
Frame = +1
Query: 184 INKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALG 363
+ K NL YL L N +G + I+K L + LK R TG +I
Sbjct: 134 LQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRM----TGN---KIENKGGMFF 186
Query: 364 DGMIAAGARLXVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXX 543
M+ + L LDL D V + ++L+ + C G
Sbjct: 187 AAMLQINSSLEKLDLGDCDLEESTVH-VGRMLKENHC---LVALHMCKHDIKNSGIQQLC 242
Query: 544 XXXXXXXXXXVFIAGRNRLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAF- 720
N++ +DG LA V + +L I + N I + G LSE
Sbjct: 243 DALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGANYLSETLT 302
Query: 721 KHNPALNHLNLNDN 762
HN +L L++ N
Sbjct: 303 SHNRSLKALSVVSN 316
>BC015581-1|AAH15581.2| 635|Homo sapiens leucine rich repeat and
fibronectin type III domain containing 4 protein.
Length = 635
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+SL LD + + ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 99 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 153
>BC007718-1|AAH07718.1| 541|Homo sapiens LRFN4 protein protein.
Length = 541
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+SL LD + + ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 99 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 153
>AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein.
Length = 975
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 202 LQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAA 381
LQ L + N G TAA A+++A HP L++ ++ + +E L LG G
Sbjct: 837 LQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQVLRDLG-GAAEG 892
Query: 382 GARLXV 399
GAR+ V
Sbjct: 893 GARVVV 898
>AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21478 fis, clone COL05012. ).
Length = 554
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 202 LQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAA 381
LQ L + N G TAA A+++A HP L++ ++ + +E L LG G
Sbjct: 416 LQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQVLRDLG-GAAEG 471
Query: 382 GARLXV 399
GAR+ V
Sbjct: 472 GARVVV 477
>AB209005-1|BAD92242.1| 622|Homo sapiens leucine rich repeat and
fibronectin type III domain containing 4 variant
protein.
Length = 622
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 133 KSLKLDTAKXAQQIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 297
+SL LD + + ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 86 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 140
>AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein.
Length = 975
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 202 LQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAA 381
LQ L + N G TAA A+++A HP L++ ++ + +E L LG G
Sbjct: 837 LQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQVLRDLG-GAAEG 892
Query: 382 GARLXV 399
GAR+ V
Sbjct: 893 GARVVV 898
>AC005757-1|AAC62258.1| 540|Homo sapiens R32611_1 protein.
Length = 540
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 595 RLENDGATALAKVFQEMGSLXEIAMPQNGIYHVGITALSEAFKHNPALNHLNLN 756
+L +GA A+A+ E L + + +N I G+ ALS A K N +L L+L+
Sbjct: 300 KLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALKVNHSLLRLDLD 353
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,921,640
Number of Sequences: 237096
Number of extensions: 2516448
Number of successful extensions: 5017
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 4754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4995
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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