Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_B13
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   5.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.1  

>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 490 RDTPPTGCSFVSP 528
           RD P  GC+F+ P
Sbjct: 90  RDLPKEGCNFLKP 102


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 105 FGPEAKPSTRSPRQGS 152
           +GPE  PST  P  GS
Sbjct: 203 YGPEPVPSTPYPPPGS 218


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 442 PAAPSGRPDGLPYR 401
           PAAP+ R +G P R
Sbjct: 344 PAAPANRGNGFPKR 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,709
Number of Sequences: 336
Number of extensions: 4537
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)