Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_B13
(836 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein. 35 0.32
AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein pr... 35 0.32
AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA seq... 35 0.32
AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting wi... 35 0.32
AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein. 35 0.32
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 34 0.73
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 34 0.73
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 34 0.73
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 34 0.73
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 34 0.73
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 32 2.2
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 32 2.2
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 26 10.0
>CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein.
Length = 863
Score = 35.1 bits (77), Expect = 0.32
Identities = 35/129 (27%), Positives = 48/129 (37%)
Frame = -1
Query: 524 DTKEQPVGGVSRPDPAGWLWSSGVFRDTSGTVWAT*RAAVPRRPTFQSLRFASKTPSAGR 345
D K+ P GG S PAG + G R +P +P +P AGR
Sbjct: 248 DAKDVPGGGPSSSAPAG-AEADGPKASPEA------RPQIPTKPRVPGKLQELASPPAGR 300
Query: 344 PWVELRRLIVVLTAVTPVPHPCSDLGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVS 165
P R+ T P P P S L + +E+ S + GR + P + RG
Sbjct: 301 PTPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHEL---PVPKPRGTPK 357
Query: 164 NTPRTPLAR 138
+ TP R
Sbjct: 358 PSEGTPAPR 366
>AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 35.1 bits (77), Expect = 0.32
Identities = 35/129 (27%), Positives = 48/129 (37%)
Frame = -1
Query: 524 DTKEQPVGGVSRPDPAGWLWSSGVFRDTSGTVWAT*RAAVPRRPTFQSLRFASKTPSAGR 345
D K+ P GG S PAG + G R +P +P +P AGR
Sbjct: 42 DAKDVPGGGPSSSAPAG-AEADGPKASPEA------RPQIPTKPRVPGKLQELASPPAGR 94
Query: 344 PWVELRRLIVVLTAVTPVPHPCSDLGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVS 165
P R+ T P P P S L + +E+ S + GR + P + RG
Sbjct: 95 PTPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHEL---PVPKPRGTPK 151
Query: 164 NTPRTPLAR 138
+ TP R
Sbjct: 152 PSEGTPAPR 160
>AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 863
Score = 35.1 bits (77), Expect = 0.32
Identities = 35/129 (27%), Positives = 48/129 (37%)
Frame = -1
Query: 524 DTKEQPVGGVSRPDPAGWLWSSGVFRDTSGTVWAT*RAAVPRRPTFQSLRFASKTPSAGR 345
D K+ P GG S PAG + G R +P +P +P AGR
Sbjct: 248 DAKDVPGGGPSSSAPAG-AEADGPKASPEA------RPQIPTKPRVPGKLQELASPPAGR 300
Query: 344 PWVELRRLIVVLTAVTPVPHPCSDLGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVS 165
P R+ T P P P S L + +E+ S + GR + P + RG
Sbjct: 301 PTPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHEL---PVPKPRGTPK 357
Query: 164 NTPRTPLAR 138
+ TP R
Sbjct: 358 PSEGTPAPR 366
>AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting with
Rab13 protein.
Length = 863
Score = 35.1 bits (77), Expect = 0.32
Identities = 35/129 (27%), Positives = 48/129 (37%)
Frame = -1
Query: 524 DTKEQPVGGVSRPDPAGWLWSSGVFRDTSGTVWAT*RAAVPRRPTFQSLRFASKTPSAGR 345
D K+ P GG S PAG + G R +P +P +P AGR
Sbjct: 248 DAKDVPGGGPSSSAPAG-AEADGPKASPEA------RPQIPTKPRVPGKLQELASPPAGR 300
Query: 344 PWVELRRLIVVLTAVTPVPHPCSDLGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVS 165
P R+ T P P P S L + +E+ S + GR + P + RG
Sbjct: 301 PTPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHEL---PVPKPRGTPK 357
Query: 164 NTPRTPLAR 138
+ TP R
Sbjct: 358 PSEGTPAPR 366
>AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein.
Length = 791
Score = 35.1 bits (77), Expect = 0.32
Identities = 35/129 (27%), Positives = 48/129 (37%)
Frame = -1
Query: 524 DTKEQPVGGVSRPDPAGWLWSSGVFRDTSGTVWAT*RAAVPRRPTFQSLRFASKTPSAGR 345
D K+ P GG S PAG + G R +P +P +P AGR
Sbjct: 176 DAKDVPGGGPSSSAPAG-AEADGPKASPEA------RPQIPTKPRVPGKLQELASPPAGR 228
Query: 344 PWVELRRLIVVLTAVTPVPHPCSDLGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVS 165
P R+ T P P P S L + +E+ S + GR + P + RG
Sbjct: 229 PTPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHEL---PVPKPRGTPK 285
Query: 164 NTPRTPLAR 138
+ TP R
Sbjct: 286 PSEGTPAPR 294
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.73
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 466 GPAGYSGIPAAPSGRPDGLPYRDGRRF 386
GP GYS PA P GR GLP R RR+
Sbjct: 336 GPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.73
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 466 GPAGYSGIPAAPSGRPDGLPYRDGRRF 386
GP GYS PA P GR GLP R RR+
Sbjct: 336 GPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.73
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 466 GPAGYSGIPAAPSGRPDGLPYRDGRRF 386
GP GYS PA P GR GLP R RR+
Sbjct: 336 GPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.73
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 466 GPAGYSGIPAAPSGRPDGLPYRDGRRF 386
GP GYS PA P GR GLP R RR+
Sbjct: 85 GPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 33.9 bits (74), Expect = 0.73
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 466 GPAGYSGIPAAPSGRPDGLPYRDGRRF 386
GP GYS PA P GR GLP R RR+
Sbjct: 336 GPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 487 PTRQAGCGPAGYSGIPAAPSGRPDGLP 407
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 487 PTRQAGCGPAGYSGIPAAPSGRPDGLP 407
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.2 bits (55), Expect(2) = 10.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 502 AVYRVPTRQ-AGCGPAGYSGIPAAPSGRPD 416
+V + PT Q AG GP+G + A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 10.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 433 PSGRPDGLPYRDG 395
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,346,476
Number of Sequences: 237096
Number of extensions: 3025213
Number of successful extensions: 12135
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12123
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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