Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_B13
         (836 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF293971-1|AAG53639.1| 1673|Drosophila melanogaster Lilliputian ...    29   7.9  
AF289034-1|AAK18163.1| 1673|Drosophila melanogaster lilliputian ...    29   7.9  
AE014134-513|AAN10400.1| 1673|Drosophila melanogaster CG8817-PC,...    29   7.9  
AE014134-512|AAN10399.1| 1673|Drosophila melanogaster CG8817-PB,...    29   7.9  
AE014134-511|AAF51180.2| 1673|Drosophila melanogaster CG8817-PA,...    29   7.9  

>AF293971-1|AAG53639.1| 1673|Drosophila melanogaster Lilliputian
            protein.
          Length = 1673

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 308  TAVTPVPHPCSD-LGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVSNTPRTPLARGP 132
            TAV+    P +D +   R   R+ Q+S   G     + G  S+++GP     + PLA+ P
Sbjct: 837  TAVSVQTQPATDTVKKGRGRPRKQQQSGGSGNLSSASAGSSSQTKGPTLTAAKKPLAKTP 896


>AF289034-1|AAK18163.1| 1673|Drosophila melanogaster lilliputian
            protein.
          Length = 1673

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 308  TAVTPVPHPCSD-LGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVSNTPRTPLARGP 132
            TAV+    P +D +   R   R+ Q+S   G     + G  S+++GP     + PLA+ P
Sbjct: 837  TAVSVQTQPATDTVKKGRGRPRKQQQSGGSGNLSSASAGSSSQTKGPTLTAAKKPLAKTP 896


>AE014134-513|AAN10400.1| 1673|Drosophila melanogaster CG8817-PC,
            isoform C protein.
          Length = 1673

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 308  TAVTPVPHPCSD-LGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVSNTPRTPLARGP 132
            TAV+    P +D +   R   R+ Q+S   G     + G  S+++GP     + PLA+ P
Sbjct: 837  TAVSVQTQPATDTVKKGRGRPRKQQQSGGSGNLSSASAGSSSQTKGPTLTAAKKPLAKTP 896


>AE014134-512|AAN10399.1| 1673|Drosophila melanogaster CG8817-PB,
            isoform B protein.
          Length = 1673

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 308  TAVTPVPHPCSD-LGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVSNTPRTPLARGP 132
            TAV+    P +D +   R   R+ Q+S   G     + G  S+++GP     + PLA+ P
Sbjct: 837  TAVSVQTQPATDTVKKGRGRPRKQQQSGGSGNLSSASAGSSSQTKGPTLTAAKKPLAKTP 896


>AE014134-511|AAF51180.2| 1673|Drosophila melanogaster CG8817-PA,
            isoform A protein.
          Length = 1673

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 308  TAVTPVPHPCSD-LGGDRTLERRVQESRLVGRALKTTLGPWSRSRGPVSNTPRTPLARGP 132
            TAV+    P +D +   R   R+ Q+S   G     + G  S+++GP     + PLA+ P
Sbjct: 837  TAVSVQTQPATDTVKKGRGRPRKQQQSGGSGNLSSASAGSSSQTKGPTLTAAKKPLAKTP 896


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,677,431
Number of Sequences: 53049
Number of extensions: 848474
Number of successful extensions: 2441
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2441
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)