Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_B05
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    25   0.50 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.6  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.2  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -2

Query: 337 HSYLQQQLCCVLDKSYC 287
           ++Y+++QL C LDK+ C
Sbjct: 29  NNYIEKQLLCALDKAPC 45


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 456 FKPFFINNISMNTFI*KITC 397
           F+PF I+NIS+ + I    C
Sbjct: 232 FEPFLISNISLVSLIFLFNC 251


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
 Frame = -3

Query: 651 NPTRNISPQCFYYAI--PDKMTI 589
           NP  NIS  C Y  I  P ++ I
Sbjct: 4   NPNTNISEDCLYLNIWVPQRLRI 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,662
Number of Sequences: 336
Number of extensions: 3842
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)