Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_B03
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    35   3e-04
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    31   0.005
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    29   0.014
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   8.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.8  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 34.7 bits (76), Expect = 3e-04
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 31  NYPWLNDPTGDGHY 72
           NYPW+NDPTGDG +
Sbjct: 521 NYPWVNDPTGDGFF 534



 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 12  CLRCPAQLPLVKRPHG 59
           C+RCP   P V  P G
Sbjct: 515 CVRCPNNYPWVNDPTG 530


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 30.7 bits (66), Expect = 0.005
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +1

Query: 31  NYPWLNDPTGDG 66
           NYPW+ DPTGDG
Sbjct: 512 NYPWILDPTGDG 523


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 0.014
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 31  NYPWLNDPTGDG 66
           NYPW+ +PTGDG
Sbjct: 519 NYPWILEPTGDG 530


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 295 CXILYVIFYCKSV 333
           C I+YV  YCK +
Sbjct: 58  CWIIYVRIYCKEI 70


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 327  LTVENHIKYXTDLLNIHVSLYYIQ 256
            L V  +I Y  +   +H+S  Y+Q
Sbjct: 1299 LGVRTNITYIEETSEVHISKEYLQ 1322


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 327  LTVENHIKYXTDLLNIHVSLYYIQ 256
            L V  +I Y  +   +H+S  Y+Q
Sbjct: 1299 LGVRTNITYIEETSEVHISKEYLQ 1322


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 88  RSWLLNSGHRPWGRL 44
           R W     HRPW +L
Sbjct: 526 RPWQTVYNHRPWQQL 540


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 321  VENHIKYXTDLLNIHVSLYYIQ 256
            V+ +I Y      +H+S  Y+Q
Sbjct: 1301 VKTNITYDESTQEVHISKEYLQ 1322


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 321  VENHIKYXTDLLNIHVSLYYIQ 256
            V+ +I Y      +H+S  Y+Q
Sbjct: 1301 VKTNITYDESTQEVHISKEYLQ 1322


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -1

Query: 68  WPSPVGS 48
           WPSP+G+
Sbjct: 277 WPSPIGA 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,148
Number of Sequences: 336
Number of extensions: 1358
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)