Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_B03
         (359 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical ...    26   6.9  
AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical ...    26   6.9  

>AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical
           protein H17B01.1b protein.
          Length = 510

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 33  LPLVKRPHGRWPLLRSHDLEPHVLY*LILIWCSSCSKY 146
           LP +     RWPL+ +  + P VL   +L+ C    KY
Sbjct: 210 LPHLLGTGDRWPLIFAFTVVPAVLQLALLMLCPESPKY 247


>AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical
           protein H17B01.1a protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 33  LPLVKRPHGRWPLLRSHDLEPHVLY*LILIWCSSCSKY 146
           LP +     RWPL+ +  + P VL   +L+ C    KY
Sbjct: 192 LPHLLGTGDRWPLIFAFTVVPAVLQLALLMLCPESPKY 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,139,997
Number of Sequences: 27780
Number of extensions: 120993
Number of successful extensions: 249
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)