Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_A17
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 84 1e-16
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 31 1.4
AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 29 3.3
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 29 4.4
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 5.8
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 7.7
U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 28 7.7
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 28 7.7
AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 83.8 bits (198), Expect = 1e-16
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +2
Query: 116 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 292
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 293 SQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQ 472
++L T +EK LP D I+ EK+ + + I NF LK TET EKN LP+ + +
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAR 119
Query: 473 EKS 481
EK+
Sbjct: 120 EKT 122
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 206 EKIVLPSAEDVATEKTQKSLFDG-IEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFL 382
EK L + + EK +K D +E+ + K E +EK +++ ++ ++E+NK
Sbjct: 120 EKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRK 179
Query: 383 NGIENFDPTKLKHTETCEKNPLPTKDVIEQEK 478
E K + E ++ ++ IE+ K
Sbjct: 180 KEEEEKKEAKRREDEEKKEAKRKEEEAIEERK 211
>AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical
protein T02H6.2 protein.
Length = 665
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +2
Query: 230 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPT 409
E A +K ++SL K DSS++K ++T NP D I +++ + + F
Sbjct: 537 EAEARKKVEESLK---RKLDSSKVKPSQTSSPNPY--TDTILSDEHLTQLARDLSKFKSN 591
Query: 410 KLKHTETCEKNPLPTKDVIEQEK 478
K C LP DV EK
Sbjct: 592 LAK----CFGTKLPADDVTSDEK 610
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 218 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 397
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 398 FDPTKLKHTETCEKN 442
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 218 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 397
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 398 FDPTKLKHTETCEKN 442
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 218 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 397
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 398 FDPTKLKHTETCEKN 442
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 218 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 397
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 398 FDPTKLKHTETCEKN 442
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 347 RLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 231
R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 73 RSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 347 RLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 231
R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 73 RSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 579 ITSFIFVFVQWQPCLGNGGVQQPRILFKS*RQVAPYANKQRVDAINRSNTDN 734
ITSFI F++ + C+ + R+LF + P+ N + ++ I S TDN
Sbjct: 131 ITSFIN-FLKAKDCIHVKEIHFNRLLFDDILSILPFFNAKVLENIKLSETDN 181
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 317 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 195
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/93 (21%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 188 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK-FDSSQLKHTETQEKNPLPDKDAIEAEK 364
R++ + ++ E + KT+ F+ I+K +S++ + + TQEK K I A++
Sbjct: 387 RELQSLTSLMAERDEQIEELKTKMFSFEMIKKDHESAKNELSRTQEKLDQMGKHLIMADQ 446
Query: 365 EKNKFLNGIENFDPTKLKHTETCEKNPLPTKDV 463
+ + F + E+ + ++ + E C + + +D+
Sbjct: 447 QCSTFKSLKESAEGSRRRAIEQCNEMVVRIRDL 479
>U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical
protein C56C10.4 protein.
Length = 221
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -3
Query: 398 SSRCRSGICSFPSPLR*RLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQ 243
S C G C P P C AG P C S G +T R+ +G+ Q
Sbjct: 25 SGTCGLGPCFNPLPALPSPCASAGCGPGFSCGSYGCYRTK--ARVHAAGTHQ 74
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 317 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 195
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 317 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 195
+S A + + C R K + +S R L EA F+WCR
Sbjct: 88 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 128
>AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical
protein W03F9.2a protein.
Length = 236
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 302 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFD 403
KHTET+++ P +K A+K N L +E N+D
Sbjct: 192 KHTETEKEAPPQEKSVTNAQKPGNPALLSLESRNYD 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,604,442
Number of Sequences: 27780
Number of extensions: 435796
Number of successful extensions: 1412
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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